RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 ERAP2Q6P179 960 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 CCDC137Q6PK04 289 aaKnown RBP15.11■□□□□ 0.01
HSPG2-201ENST00000374673 PRR23BQ6ZRT6 265 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 TRIM69Q86WT6 500 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 SLC41A1Q8IVJ1 513 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 TMEFF1Q8IYR6 380 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 TBC1D3Q8IZP1 549 aaPredicted RBP15.11■□□□□ 0.01
HSPG2-201ENST00000374673 NDUFAF2Q8N183 169 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 CCDC89Q8N998 374 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 FOXJ1Q92949 421 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 FEM1CQ96JP0 617 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 MRGPRX2Q96LB1 330 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 MLPHQ9BV36 600 aaPredicted RBP15.11■□□□□ 0.01
HSPG2-201ENST00000374673 PCDH12Q9NPG4 1184 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 FAM86C1Q9NVL1 165 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 UBP1Q9NZI7 540 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 PAK5Q9P286 719 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 AAR2Q9Y312 384 aaKnown RBP15.11■□□□□ 0.01
HSPG2-201ENST00000374673 PLXNA2O75051 1894 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 A0A0J9YYE9 177 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 LOC285095A0A1B0GVY8 99 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 FAM47DPA6NHR8 397 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 F5H423 210 aaPredicted RBP15.1■□□□□ 0.01
HSPG2-201ENST00000374673 CCDC188H7C350 402 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 PMPCBO75439 489 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 METTL18O95568 372 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 EPOP01588 193 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 TRBC1P01850 177 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 MMP12P39900 470 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 CCR5P51681 352 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 WNT3AP56704 352 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 PPP2CBP62714 309 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 PPP2CAP67775 309 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 PCSK7Q16549 785 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 KIAA1161Q6NSJ0 714 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 C4orf22Q6V702 233 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 DPPA4Q7L190 304 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 GSTA5Q7RTV2 222 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 GLIS1Q8NBF1 620 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 SUMF1Q8NBK3 374 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 LPCAT1Q8NF37 534 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 GRK7Q8WTQ7 553 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 IFT43Q96FT9 208 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 SCRN2Q96FV2 425 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 HSPA12BQ96MM6 686 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 MCCC1Q96RQ3 725 aaPredicted RBP15.1■□□□□ 0.01
HSPG2-201ENST00000374673 ADGRE3Q9BY15 652 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 GGT7Q9UJ14 662 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 ITM2BQ9Y287 266 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.1■□□□□ 0.01
HSPG2-201ENST00000374673 TRPM6Q9BX84 2022 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 DOCK9Q9BZ29 2069 aa15.1■□□□□ 0.01
HSPG2-201ENST00000374673 GOLGA6CA6NDK9 693 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 GOLGA6BA6NDN3 693 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 ANKRD66B4E2M5 251 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 NEMP1O14524 444 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 LATO43561 262 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 RNGTTO60942 597 aaKnown RBP15.09■□□□□ 0.01
HSPG2-201ENST00000374673 PCDH8O95206 1070 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 NDST3O95803 873 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 PRKCGP05129 697 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 IGHV4-34P06331 123 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 GOLGA6DP0CG33 693 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 CYP2A6P11509 494 aaPredicted RBP15.09■□□□□ 0.01
HSPG2-201ENST00000374673 ETS1P14921 441 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 ITIH2P19823 946 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 RPL22P35268 128 aaKnown RBP15.09■□□□□ 0.01
HSPG2-201ENST00000374673 FDFT1P37268 417 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 EPHB1P54762 984 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 RALGDSQ12967 914 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 QPCTQ16769 361 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 TMEM259Q4ZIN3 620 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 KCTD11Q693B1 232 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 USP45Q70EL2 814 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 PRUNE1Q86TP1 453 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 HORMAD1Q86X24 394 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 DEFB119Q8N690 84 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 IPMKQ8NFU5 416 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 ZNF592Q92610 1267 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 SLCO2A1Q92959 643 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 BIRC7Q96CA5 298 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 LOXL4Q96JB6 756 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 RUNDC3BQ96NL0 473 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 LYSMD1Q96S90 227 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 DDX47Q9H0S4 455 aaKnown RBP15.09■□□□□ 0.01
HSPG2-201ENST00000374673 GOLGA6AQ9NYA3 693 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 B4GALT6Q9UBX8 382 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 PCYOX1Q9UHG3 505 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 FEZ2Q9UHY8 353 aaPredicted RBP15.09■□□□□ 0.01
HSPG2-201ENST00000374673 CDC23Q9UJX2 597 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 RAB23Q9ULC3 237 aa15.09■□□□□ 0.01
HSPG2-201ENST00000374673 SMG5Q9UPR3 1016 aaKnown RBP15.09■□□□□ 0.01
HSPG2-201ENST00000374673 ZFR2Q9UPR6 939 aaKnown RBP15.09■□□□□ 0.01
HSPG2-201ENST00000374673 A0A1W2PQU0 124 aa15.08■□□□□ 0
HSPG2-201ENST00000374673 PRR23AA6NEV1 266 aa15.08■□□□□ 0
HSPG2-201ENST00000374673 CAPN8A6NHC0 703 aa15.08■□□□□ 0
HSPG2-201ENST00000374673 MEI4A8MW99 385 aa15.08■□□□□ 0
HSPG2-201ENST00000374673 PROB1E7EW31 1015 aa15.08■□□□□ 0
HSPG2-201ENST00000374673 PSMD3O43242 534 aa15.08■□□□□ 0
HSPG2-201ENST00000374673 URI1O94763 535 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms