RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 IGLON5A6NGN9 336 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 RIOK3O14730 519 aaKnown RBP16.09■□□□□ 0.17
HDHD3-202ENST00000374180 KIF5CO60282 957 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 PGLSO95336 258 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 CPP00450 1065 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 PRKCGP05129 697 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 PRLRP16471 622 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 CA4P22748 312 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 RBL1P28749 1068 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 CD86P42081 329 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 CSNK1EP49674 416 aaKnown RBP16.09■□□□□ 0.17
HDHD3-202ENST00000374180 WASHC5Q12768 1159 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 TEAD4Q15561 434 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 AASDHQ4L235 1098 aaPredicted RBP16.09■□□□□ 0.17
HDHD3-202ENST00000374180 TMEM259Q4ZIN3 620 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 PID1Q7Z2X4 250 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 CDKL3Q8IVW4 592 aaPredicted RBP16.09■□□□□ 0.17
HDHD3-202ENST00000374180 CXorf40AQ8TE69 158 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 SLC6A18Q96N87 628 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 VAT1Q99536 393 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 WRAP53Q9BUR4 548 aaKnown RBP16.09■□□□□ 0.17
HDHD3-202ENST00000374180 SLC17A9Q9BYT1 436 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 SLC25A51Q9H1U9 297 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 C10orf88Q9H8K7 445 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 CAPN10Q9HC96 672 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 AASDHPPTQ9NRN7 309 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 KLHL8Q9P2G9 620 aaPredicted RBP16.09■□□□□ 0.17
HDHD3-202ENST00000374180 PYCARDQ9ULZ3 195 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 PHTF1Q9UMS5 762 aa16.09■□□□□ 0.17
HDHD3-202ENST00000374180 LNP1A1A4G5 178 aa16.08■□□□□ 0.16
HDHD3-202ENST00000374180 PRAMEF26H0Y7S4 382 aa16.08■□□□□ 0.16
HDHD3-202ENST00000374180 MMP20O60882 483 aa16.08■□□□□ 0.16
HDHD3-202ENST00000374180 PAK4O96013 591 aaPredicted RBP16.08■□□□□ 0.16
HDHD3-202ENST00000374180 NFKBIAP25963 317 aa16.08■□□□□ 0.16
HDHD3-202ENST00000374180 MSNP26038 577 aaKnown RBP16.08■□□□□ 0.16
HDHD3-202ENST00000374180 IHHQ14623 411 aa16.08■□□□□ 0.16
HDHD3-202ENST00000374180 TMEM52BQ4KMG9 183 aa16.08■□□□□ 0.16
HDHD3-202ENST00000374180 NAPEPLDQ6IQ20 393 aa16.08■□□□□ 0.16
HDHD3-202ENST00000374180 ADAT2Q7Z6V5 191 aaKnown RBP16.08■□□□□ 0.16
HDHD3-202ENST00000374180 SLC13A5Q86YT5 568 aaPredicted RBP16.08■□□□□ 0.16
HDHD3-202ENST00000374180 RBM15Q96T37 977 aaKnown RBP eCLIP16.08■□□□□ 0.164e-7■■■■■ 29.7
HDHD3-202ENST00000374180 C1QTNF2Q9BXJ5 285 aa16.08■□□□□ 0.16
HDHD3-202ENST00000374180 GLOD4Q9HC38 313 aa16.08■□□□□ 0.16
HDHD3-202ENST00000374180 TRHDEQ9UKU6 1024 aa16.08■□□□□ 0.16
HDHD3-202ENST00000374180 CHKBQ9Y259 395 aa16.08■□□□□ 0.16
HDHD3-202ENST00000374180 TRPM6Q9BX84 2022 aa16.08■□□□□ 0.16
HDHD3-202ENST00000374180 CACNA1EQ15878 2313 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 ENC1O14682 589 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 SYPP08247 313 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 MMP2P08253 660 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 PDHA1P08559 390 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 CD38P28907 300 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 AKT2P31751 481 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 MMP12P39900 470 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 GRIA4P48058 902 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 EPHB1P54762 984 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 SKOR1P84550 965 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 SEMG2Q02383 582 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 LMNB2Q03252 620 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 STAT4Q14765 748 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 NDUFAF2Q8N183 169 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 ZNF567Q8N184 647 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 SLC35F6Q8N357 371 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 SKA1Q96BD8 255 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 IMP4Q96G21 291 aaKnown RBP16.07■□□□□ 0.16
HDHD3-202ENST00000374180 TDRD1Q9BXT4 1180 aaKnown RBP16.07■□□□□ 0.16
HDHD3-202ENST00000374180 FSCN3Q9NQT6 498 aa16.07■□□□□ 0.16
HDHD3-202ENST00000374180 R3HDM2Q9Y2K5 976 aaKnown RBP16.07■□□□□ 0.16
HDHD3-202ENST00000374180 USP27XA6NNY8 438 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 A8MX80 341 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 ARHGAP33O14559 1287 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 WNT9AO14904 365 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 KCNN4O15554 427 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 FZD6O60353 706 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 ZNF189O75820 626 aaPredicted RBP16.06■□□□□ 0.16
HDHD3-202ENST00000374180 TM7SF2O76062 418 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 STK10O94804 968 aaKnown RBP16.06■□□□□ 0.16
HDHD3-202ENST00000374180 ENGP17813 658 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 HNRNPA2B1P22626 353 aaKnown RBP16.06■□□□□ 0.16
HDHD3-202ENST00000374180 CXCR5P32302 372 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 CD68P34810 354 aaPredicted RBP16.06■□□□□ 0.16
HDHD3-202ENST00000374180 LIG3P49916 1009 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 ATXN3P54252 364 aaPredicted RBP16.06■□□□□ 0.16
HDHD3-202ENST00000374180 FGL2Q14314 439 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 PIH1D2Q8WWB5 315 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 ASB12Q8WXK4 309 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 SCRN2Q96FV2 425 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 MYOCQ99972 504 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 PCDH9Q9HC56 1237 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 RXFP3Q9NSD7 469 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 ANKRD36A6QL64 1941 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 CEP250Q9BV73 2442 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 DOCK9Q9BZ29 2069 aa16.06■□□□□ 0.16
HDHD3-202ENST00000374180 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.05■□□□□ 0.16
HDHD3-202ENST00000374180 A0A1B0GVT2 93 aa16.05■□□□□ 0.16
HDHD3-202ENST00000374180 CEP104O60308 925 aa16.05■□□□□ 0.16
HDHD3-202ENST00000374180 GDF9O60383 454 aa16.05■□□□□ 0.16
HDHD3-202ENST00000374180 NFKB1P19838 968 aa16.05■□□□□ 0.16
HDHD3-202ENST00000374180 C21orf59P57076 290 aa16.05■□□□□ 0.16
HDHD3-202ENST00000374180 RPL26P61254 145 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms