RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SLC27A6Q9Y2P4 619 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 PCDHB9Q9Y5E1 797 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 GOLGA8RI6L899 631 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 SLC7A4O43246 635 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 CISD3P0C7P0 127 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 PYGBP11216 843 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 NNMTP40261 264 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 EPHB1P54762 984 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 ACVR1Q04771 509 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 SH2D5Q6ZV89 423 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 MFSD6LQ8IWD5 586 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 RYBPQ8N488 228 aaPredicted RBP26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 STYXQ8WUJ0 223 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 KLF6Q99612 283 aaPredicted RBP26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 HACD3Q9P035 362 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 TIMM44O43615 452 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 RFPL1O75677 317 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 ZWINTO95229 277 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 PGLSO95336 258 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 PIRTP0C851 137 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 MTHFRP42898 656 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 GRIA4P48058 902 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 LIMK2P53671 638 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 PRAMEP78395 509 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 PDE1BQ01064 536 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 FCHO2Q0JRZ9 810 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 TAF1AQ15573 450 aaPredicted RBP26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 DLG2Q15700 870 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 GEN1Q17RS7 908 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 NEPROQ6NW34 567 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 VITQ6UXI7 678 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 GLT6D1Q7Z4J2 308 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 CAMK1DQ8IU85 385 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 OR6K2Q8NGY2 324 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 MGARPQ8TDB4 240 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 ATXN2LQ8WWM7 1075 aaKnown RBP26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 MYO19Q96H55 970 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 TUBGCP5Q96RT8 1024 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 ECT2Q9H8V3 914 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 CLDND1Q9NY35 253 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 ERVW-1Q9UQF0 538 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 ARL5AQ9Y689 179 aa26.44■■□□□ 1.82
ATPAF1-202ENST00000371937 ANKRD36A6QL64 1941 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 C2orf81A6NN90 581 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 SRRM3A6NNA2 597 aaPredicted RBP26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 TRIM24O15164 1050 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 HTRA2O43464 458 aaPredicted RBP26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 TBX10O75333 385 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 ASLP04424 464 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 PRKCGP05129 697 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 ATP5BP06576 529 aaKnown RBP26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 SERPINA4P29622 427 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 RAD51Q06609 339 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 QPCTQ16769 361 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 MYLK3Q32MK0 819 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 TMEM215Q68D42 235 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 ETFBKMTQ8IXQ9 262 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 LMNTD2Q8IXW0 634 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 ACMSDQ8TDX5 336 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 DYDC1Q8WWB3 177 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 APOPT1Q96IL0 206 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 MYADMQ96S97 322 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 SLCO3A1Q9UIG8 710 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 SLC8A2Q9UPR5 921 aa26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 TNRC18O15417 2968 aaPredicted RBP26.43■■□□□ 1.82
ATPAF1-202ENST00000371937 TULP3O75386 442 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 RPA3P35244 121 aaPredicted RBP26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 VASPP50552 380 aaPredicted RBP26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 DLX2Q07687 328 aaPredicted RBP26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 GRM3Q14832 879 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 LRIT3Q3SXY7 679 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 CARD16Q5EG05 197 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 EP400NLQ6ZTU2 488 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 KIAA0408Q6ZU52 694 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 PLPP6Q8IY26 295 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 YAF2Q8IY57 180 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 MFSD1Q9H3U5 465 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 KCTD3Q9Y597 815 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 SPO11Q9Y5K1 396 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 MTCH2Q9Y6C9 303 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 PRRC2BQ5JSZ5 2229 aaKnown RBP26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 TRAFD1O14545 582 aaPredicted RBP26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 TM9SF1O15321 606 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 POP4O95707 220 aaKnown RBP26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 HADHAP40939 763 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 OR6P1Q8NGX9 317 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 DENND1AQ8TEH3 1009 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 HDAC10Q969S8 669 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 MCMBPQ9BTE3 642 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 CPEB1Q9BZB8 566 aaKnown RBP26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 DEC1Q9P2X7 70 aa26.42■■□□□ 1.82
ATPAF1-202ENST00000371937 TMEM265A0A087WTH1 108 aa26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 SRPRAP08240 638 aaKnown RBP26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 LAMP2P13473 410 aa26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 SLC8A1P32418 973 aa26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 CCNFP41002 786 aa26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 SEPT7Q16181 437 aaKnown RBP26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 ZNF470Q6ECI4 717 aa26.41■■□□□ 1.82
ATPAF1-202ENST00000371937 FSTL4Q6MZW2 842 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms