RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 EMILIN2Q9BXX0 1053 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 ARMC7Q9H6L4 198 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 COQ10BQ9H8M1 238 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 KLHL1Q9NR64 748 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 FFAR3O14843 346 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 GPR42O15529 346 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 ZNF12P17014 697 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 GPR15P49685 360 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 RAB27AP51159 221 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 QPRTQ15274 297 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 DLG2Q15700 870 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 STK40Q8N2I9 435 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 ASZ1Q8WWH4 475 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 PPM1HQ9ULR3 514 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 ITM2BQ9Y287 266 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 COQ6Q9Y2Z9 468 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 VWA7Q9Y334 891 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 LSM1O15116 133 aaKnown RBP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 POMCP01189 267 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 FKBP1AP62942 108 aaKnown RBP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 BOP1Q14137 746 aaKnown RBP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 TAF1CQ15572 869 aaPredicted RBP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 KLHDC10Q6PID8 442 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 FAM156AQ8NDB6 213 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 BSNDQ8WZ55 320 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 NACC2Q96BF6 587 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 ABCC13Q9NSE7 274 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 GSTK1Q9Y2Q3 226 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 WBP11Q9Y2W2 641 aaKnown RBP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 FGFR1P11362 822 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 RPS9P46781 194 aaKnown RBP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 CLK2P49760 499 aaKnown RBP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 EN1Q05925 392 aaPredicted RBP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 STARD3Q14849 445 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 CRY1Q16526 586 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 ZNF284Q2VY69 593 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 NXNL1Q96CM4 212 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 CLN6Q9NWW5 311 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 ARL15Q9NXU5 204 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 SAMHD1Q9Y3Z3 626 aaKnown RBP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 H7C4K7 107 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 IPO13O94829 963 aaKnown RBP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 FADS2O95864 444 aaKnown RBP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 DGKAP23743 735 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 AXLP30530 894 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 GSTM5P46439 218 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 CENPAP49450 140 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 LIMK2P53671 638 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 SLC18A1P54219 525 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 ACSM2AQ08AH3 577 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 WSCD1Q658N2 575 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 ACSM2BQ68CK6 577 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 POTEHQ6S545 545 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 DPP10Q8N608 796 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 ZFP42Q96MM3 310 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 QKIQ96PU8 341 aaKnown RBP eCLIP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 UBA2Q9UBT2 640 aaPredicted RBP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 TDRKHQ9Y2W6 561 aaKnown RBP15.99■□□□□ 0.15
COL17A1-202ENST00000369733 PCDHB7Q9Y5E2 793 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 B4GALT5O43286 388 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 TCF3P15923 654 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 MTHFRP42898 656 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 C11orf88Q6PI97 169 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 LGI2Q8N0V4 545 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 DEPDC4Q8N2C3 294 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 MCOLN3Q8TDD5 553 aa15.99■□□□□ 0.15
COL17A1-202ENST00000369733 SH3BGRLO75368 114 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 H6PDO95479 791 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 EGFRP00533 1210 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 CETPP11597 493 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 CRATP43155 626 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 POLD2P49005 469 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 KIAA0319LQ8IZA0 1049 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 MRPL39Q9NYK5 338 aaKnown RBP15.98■□□□□ 0.15
COL17A1-202ENST00000369733 ARHGAP28Q9P2N2 729 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 UNGP13051 313 aaPredicted RBP15.98■□□□□ 0.15
COL17A1-202ENST00000369733 CDK9P50750 372 aaKnown RBP15.98■□□□□ 0.15
COL17A1-202ENST00000369733 NADK2Q4G0N4 442 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 PYDC2Q56P42 97 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 TXNDC11Q6PKC3 985 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 EIF3MQ7L2H7 374 aaKnown RBP15.98■□□□□ 0.15
COL17A1-202ENST00000369733 SIX5Q8N196 739 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 CPSF7Q8N684 471 aaKnown RBP15.98■□□□□ 0.15
COL17A1-202ENST00000369733 CENPNQ96H22 339 aaPredicted RBP15.98■□□□□ 0.15
COL17A1-202ENST00000369733 EPB41L4BQ9H329 900 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 RAPGEFL1Q9UHV5 662 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 NTRK1P04629 796 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 ADSLP30566 484 aaPredicted RBP15.98■□□□□ 0.15
COL17A1-202ENST00000369733 VPS26BQ4G0F5 336 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 GLYATQ6IB77 296 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 KIAA0408Q6ZU52 694 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 FAR1Q8WVX9 515 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 PPP1R14BQ96C90 147 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 SENP8Q96LD8 212 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 KCTD15Q96SI1 283 aaPredicted RBP15.98■□□□□ 0.15
COL17A1-202ENST00000369733 B3GNT5Q9BYG0 378 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 ST6GALNAC4Q9H4F1 302 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 CAPN10Q9HC96 672 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 TRPM5Q9NZQ8 1165 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 PCDHGC3Q9UN70 934 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms