RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TSACCQ96A04 125 aaPredicted RBP16.15■□□□□ 0.18
CKS1B-202ENST00000368436 TUBGCP5Q96RT8 1024 aa16.15■□□□□ 0.18
CKS1B-202ENST00000368436 EIF3CQ99613 913 aaKnown RBP16.15■□□□□ 0.18
CKS1B-202ENST00000368436 CCDC3Q9BQI4 270 aa16.15■□□□□ 0.18
CKS1B-202ENST00000368436 APOOQ9BUR5 198 aa16.15■□□□□ 0.18
CKS1B-202ENST00000368436 EDEM3Q9BZQ6 932 aa16.15■□□□□ 0.18
CKS1B-202ENST00000368436 SLC39A8Q9C0K1 460 aa16.15■□□□□ 0.18
CKS1B-202ENST00000368436 CDRT15L2A8MXV6 281 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 NTN3O00634 580 aaPredicted RBP16.14■□□□□ 0.17
CKS1B-202ENST00000368436 RASGRP1O95267 797 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 ALPIP09923 528 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 DESP17661 470 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 HTR1BP28222 390 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 RBMS1P29558 406 aaKnown RBP16.14■□□□□ 0.17
CKS1B-202ENST00000368436 MMP12P39900 470 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 MLLT3P42568 568 aaPredicted RBP16.14■□□□□ 0.17
CKS1B-202ENST00000368436 RGRP47804 291 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 LIG3P49916 1009 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 PAPOLAP51003 745 aaKnown RBP16.14■□□□□ 0.17
CKS1B-202ENST00000368436 PDX1P52945 283 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 MAMLD1Q13495 774 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 INPP5AQ14642 412 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 NFATC4Q14934 902 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 ELOCQ15369 112 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 AFMIDQ63HM1 303 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 PLEKHA7Q6IQ23 1121 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 PPP1R2P3Q6NXS1 205 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 ERAP2Q6P179 960 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 ENPP7Q6UWV6 458 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 SRLQ86TD4 932 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 ZSWIM9Q86XI8 627 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 CAMK1DQ8IU85 385 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 HID1Q8IV36 788 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 ARFGAP1Q8N6T3 406 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 ARL10Q8N8L6 244 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 SNRNP27Q8WVK2 155 aaKnown RBP16.14■□□□□ 0.17
CKS1B-202ENST00000368436 SCG3Q8WXD2 468 aaKnown RBP16.14■□□□□ 0.17
CKS1B-202ENST00000368436 CELF6Q96J87 481 aaKnown RBP16.14■□□□□ 0.17
CKS1B-202ENST00000368436 CPNE5Q9HCH3 593 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 PARVAQ9NVD7 372 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 GPATCH2LQ9NWQ4 482 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 TAS2R14Q9NYV8 317 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 MYO6Q9UM54 1294 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 AP4E1Q9UPM8 1137 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 ATP8A1Q9Y2Q0 1164 aa16.14■□□□□ 0.17
CKS1B-202ENST00000368436 ARHGAP42A6NI28 874 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 ERVH48-1M5A8F1 160 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 EEF2KO00418 725 aaKnown RBP16.13■□□□□ 0.17
CKS1B-202ENST00000368436 KLK10O43240 276 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 CTSEP14091 401 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 TNFAIP3P21580 790 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 MTM1Q13496 603 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 CA9Q16790 459 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 ERMARDQ5T6L9 678 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 NYAP1Q6ZVC0 841 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 ARHGAP12Q8IWW6 846 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 TSEN2Q8NCE0 465 aaKnown RBP16.13■□□□□ 0.17
CKS1B-202ENST00000368436 WDR36Q8NI36 951 aaKnown RBP16.13■□□□□ 0.17
CKS1B-202ENST00000368436 ECHDC3Q96DC8 303 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 WBP1Q96G27 269 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 DHX35Q9H5Z1 703 aaKnown RBP16.13■□□□□ 0.17
CKS1B-202ENST00000368436 GULP1Q9UBP9 304 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 DOLKQ9UPQ8 538 aa16.13■□□□□ 0.17
CKS1B-202ENST00000368436 CCDC187A0A096LP49 1063 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 PMS2P1A4D2B8 440 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 TMEM191CA6NGB0 347 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 PSMA2P25787 234 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 SERPINA4P29622 427 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 SRP54P61011 504 aaKnown RBP16.12■□□□□ 0.17
CKS1B-202ENST00000368436 RHDQ02161 417 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 NSUN2Q08J23 767 aaKnown RBP eCLIP16.12■□□□□ 0.17
CKS1B-202ENST00000368436 RALGDSQ12967 914 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 SPIDRQ14159 915 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 CFAP58Q5T655 872 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 RD3Q7Z3Z2 195 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 CLEC14AQ86T13 490 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 GKN2Q86XP6 184 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 ZNF843Q8N446 348 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 KYQ8NBH2 561 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 ATL2Q8NHH9 583 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 PCDH19Q8TAB3 1148 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 WDR92Q96MX6 357 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 PEBP4Q96S96 227 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 SNRNP25Q9BV90 132 aaKnown RBP16.12■□□□□ 0.17
CKS1B-202ENST00000368436 ATP13A3Q9H7F0 1226 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 RABGEF1Q9UJ41 708 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 OR1A2Q9Y585 309 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 DGKBQ9Y6T7 804 aa16.12■□□□□ 0.17
CKS1B-202ENST00000368436 MGAQ8IWI9 3026 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 SCN8AQ9UQD0 1980 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 TMCO5BA8MYB1 307 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 PALMO75781 387 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 TNFP01375 233 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 PRKCGP05129 697 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 PCCBP05166 539 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 ATP1A3P13637 1013 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 ERCC2P18074 760 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 HCAR3P49019 387 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 IL10RBQ08334 325 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 VAC14Q08AM6 782 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms