RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 WISP3O95389 354 aaPredicted RBP14.37□□□□□ -0.11
CD48-201ENST00000368045 PEX11BO96011 259 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 HNRNPLP14866 589 aaKnown RBP eCLIP14.37□□□□□ -0.11
CD48-201ENST00000368045 IMPDH1P20839 514 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 GRIA2P42262 883 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 NFKB2Q00653 900 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 LRP8Q14114 963 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 HECTD2Q5U5R9 776 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 GK5Q6ZS86 529 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 SPATA24Q86W54 205 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 CILP2Q8IUL8 1156 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 C2orf69Q8N8R5 385 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 TMEM102Q8N9M5 508 aaPredicted RBP14.37□□□□□ -0.11
CD48-201ENST00000368045 L3HYPDHQ96EM0 354 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 SGF29Q96ES7 293 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 PKP2Q99959 881 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 NDFIP2Q9NV92 336 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 CACNA2D2Q9NY47 1150 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 ADA2Q9NZK5 511 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 PADI4Q9UM07 663 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 TLR6Q9Y2C9 796 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 VWA7Q9Y334 891 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 AP4B1Q9Y6B7 739 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 MROH6A6NGR9 719 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 GPC4O75487 556 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 SNRPB2P08579 225 aaKnown RBP14.37□□□□□ -0.11
CD48-201ENST00000368045 CTSHP09668 335 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 CCDC166P0CW27 439 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 ACADVLP49748 655 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 PDAP1Q13442 181 aaKnown RBP14.37□□□□□ -0.11
CD48-201ENST00000368045 FASTKQ14296 549 aaKnown RBP14.37□□□□□ -0.11
CD48-201ENST00000368045 DSC3Q14574 896 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 ADRM1Q16186 407 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 USP41Q3LFD5 358 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 REP15Q6BDI9 236 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 GDF6Q6KF10 455 aaPredicted RBP14.37□□□□□ -0.11
CD48-201ENST00000368045 FAM45BPQ6NSW5 357 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 C14orf80Q86SX3 495 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 TEX26Q8N6G2 289 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 FAM45AQ8TCE6 357 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 SOCS4Q8WXH5 440 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 PEX13Q92968 403 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 DGCR14Q96DF8 476 aaKnown RBP14.37□□□□□ -0.11
CD48-201ENST00000368045 SLC39A13Q96H72 371 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 KLHL32Q96NJ5 620 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 ASB2Q96Q27 587 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 TMEM209Q96SK2 561 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 NOL6Q9H6R4 1146 aaKnown RBP14.37□□□□□ -0.11
CD48-201ENST00000368045 SUDS3Q9H7L9 328 aaPredicted RBP14.37□□□□□ -0.11
CD48-201ENST00000368045 TMEM248Q9NWD8 314 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 PCDHB8Q9UN66 801 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 SCML2Q9UQR0 700 aa14.37□□□□□ -0.11
CD48-201ENST00000368045 TRIP12Q14669 1992 aaPredicted RBP14.37□□□□□ -0.11
CD48-201ENST00000368045 SHROOM3Q8TF72 1996 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 A0A0U1RQF3 1178 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 NEMP2A6NFY4 417 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 STX16-NPEPL1H3BU86 382 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 AURKAO14965 403 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 TRIM24O15164 1050 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 POMCP01189 267 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 KCNA5P22460 613 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 GRIK1P39086 918 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 LSAMPQ13449 338 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 PCSK7Q16549 785 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 AGKQ53H12 422 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 SAMD4BQ5PRF9 694 aaKnown RBP14.36□□□□□ -0.11
CD48-201ENST00000368045 ACBD5Q5T8D3 534 aaPredicted RBP14.36□□□□□ -0.11
CD48-201ENST00000368045 MARC1Q5VT66 337 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 MON1AQ86VX9 555 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 ZNF683Q8IZ20 524 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 OR13J1Q8NGT2 312 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 DDI1Q8WTU0 396 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 TADA1Q96BN2 335 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 PRICKLE1Q96MT3 831 aaPredicted RBP14.36□□□□□ -0.11
CD48-201ENST00000368045 NDNQ99608 321 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 ATXN3LQ9H3M9 355 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 GSTO2Q9H4Y5 243 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 NT5MQ9NPB1 228 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 SPAG4Q9NPE6 437 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 PRDM5Q9NQX1 630 aaPredicted RBP14.36□□□□□ -0.11
CD48-201ENST00000368045 MPP6Q9NZW5 540 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 TRAF6Q9Y4K3 522 aa14.36□□□□□ -0.11
CD48-201ENST00000368045 PATJQ8NI35 1801 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 A0A1W2PQH9 124 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 BBIP1A8MTZ0 92 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 INPPL1O15357 1258 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 CLPTM1O96005 669 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 MOCS2O96007 188 aaPredicted RBP14.35□□□□□ -0.11
CD48-201ENST00000368045 RHDQ02161 417 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 ZNF789Q5FWF6 425 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 PIK3R6Q5UE93 754 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 HMGCLL1Q8TB92 370 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 ROPN1LQ96C74 230 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 ZYG11BQ9C0D3 744 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 AGO3Q9H9G7 860 aaKnown RBP14.35□□□□□ -0.11
CD48-201ENST00000368045 POPDC3Q9HBV1 291 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 CYP4F12Q9HCS2 524 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 UBAP1Q9NZ09 502 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 CD300AQ9UGN4 299 aa14.35□□□□□ -0.11
CD48-201ENST00000368045 PADI3Q9ULW8 664 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms