RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 NFKBIZQ9BYH8 718 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 PIF1Q9H611 641 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 CXorf21Q9HAI6 301 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 PLGRKTQ9HBL7 147 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 WDR6Q9NNW5 1121 aaKnown RBP13.67□□□□□ -0.22
PRKN-205ENST00000366897 UTP6Q9NYH9 597 aaKnown RBP13.67□□□□□ -0.22
PRKN-205ENST00000366897 STAP1Q9ULZ2 295 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 TIMM13Q9Y5L4 95 aaPredicted RBP13.67□□□□□ -0.22
PRKN-205ENST00000366897 NME4O00746 187 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 B4GAT1O43505 415 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 USP17L7P0C7H9 530 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 MTHFD1P11586 935 aaKnown RBP13.66□□□□□ -0.22
PRKN-205ENST00000366897 ACADSBP45954 432 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 CLCN2P51788 898 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 ATP1A4Q13733 1029 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 PCSK7Q16549 785 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 FAM83EQ2M2I3 478 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 KIF19Q2TAC6 998 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 AARS2Q5JTZ9 985 aaKnown RBP13.66□□□□□ -0.22
PRKN-205ENST00000366897 BTBD8Q5XKL5 378 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 CATSPER4Q7RTX7 472 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 LYSMD3Q7Z3D4 306 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 PIWIL4Q7Z3Z4 852 aaKnown RBP13.66□□□□□ -0.22
PRKN-205ENST00000366897 FUNDC1Q8IVP5 155 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 B3GALNT2Q8NCR0 500 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 SHCBP1Q8NEM2 672 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 HSFY1Q96LI6 401 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 TEKT5Q96M29 485 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 ADI1Q9BV57 179 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 POLR1BQ9H9Y6 1135 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 TMEM30AQ9NV96 361 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 FAIMQ9NVQ4 179 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 IPO11Q9UI26 975 aaKnown RBP13.66□□□□□ -0.22
PRKN-205ENST00000366897 OAZ3Q9UMX2 235 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 SLC8A2Q9UPR5 921 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 LRRC14BA6NHZ5 514 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 LRIG2O94898 1065 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 KCNC1P48547 511 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 CXCR3P49682 368 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 SQLEQ14534 574 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 SLC44A4Q53GD3 710 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 Q6ZNX1 250 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 PAQR9Q6ZVX9 377 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 CRYBG2Q8N1P7 616 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 NAT16Q8N8M0 369 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 APPL2Q8NEU8 664 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 OR2T34Q8NGX1 318 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 OR2T3Q8NH03 318 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 ANKRD49Q8WVL7 239 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 LZICQ8WZA0 190 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 TCF12Q99081 682 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 OSMRQ99650 979 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 EFHD1Q9BUP0 239 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 RHOBTB2Q9BYZ6 727 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 UPF3AQ9H1J1 476 aaKnown RBP13.66□□□□□ -0.22
PRKN-205ENST00000366897 PLEKHA5Q9HAU0 1116 aa13.66□□□□□ -0.22
PRKN-205ENST00000366897 SUPT7LO94864 414 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 ALDOCP09972 364 aaKnown RBP13.65□□□□□ -0.22
PRKN-205ENST00000366897 FAM163BP0C2L3 166 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 COL6A2P12110 1019 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 NCK1P16333 377 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 ATP5F1P24539 256 aaPredicted RBP13.65□□□□□ -0.22
PRKN-205ENST00000366897 NAPEPLDQ6IQ20 393 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 PPP4R4Q6NUP7 873 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 PKN3Q6P5Z2 889 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 RYBPQ8N488 228 aaPredicted RBP13.65□□□□□ -0.22
PRKN-205ENST00000366897 OTUD5Q96G74 571 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 KIFC1Q9BW19 673 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 DNAI2Q9GZS0 605 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 IGSF5Q9NSI5 407 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 OR12D3Q9UGF7 316 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 H3BMQ9 156 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 USP2O75604 605 aaPredicted RBP13.65□□□□□ -0.22
PRKN-205ENST00000366897 SLC10A3P09131 477 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 NUP107P57740 925 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 GEN1Q17RS7 908 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 SAMD4BQ5PRF9 694 aaKnown RBP13.65□□□□□ -0.22
PRKN-205ENST00000366897 LDLRAD1Q5T700 205 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 CLEC20AQ6ZU45 233 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 ERMP1Q7Z2K6 904 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 RASAL3Q86YV0 1011 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 COG8Q96MW5 612 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 BIRC8Q96P09 236 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 MRPL57Q9BQC6 102 aaKnown RBP13.65□□□□□ -0.22
PRKN-205ENST00000366897 TKTL2Q9H0I9 626 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 ALG9Q9H6U8 611 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 TMEM181Q9P2C4 612 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 FBXO5Q9UKT4 447 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 SQORQ9Y6N5 450 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 A0A087WXM4 84 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 MAGEB16A2A368 324 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 EI24O14681 340 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 BMP10O95393 424 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 CPB1P15086 417 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 NPR3P17342 541 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 TNK2Q07912 1038 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 ARHGAP1Q07960 439 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 KCTD2Q14681 263 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 ZBTB6Q15916 424 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 ZBED5Q49AG3 693 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms