RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 EPB42P16452 691 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 ARF4P18085 180 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 ITGADQ13349 1161 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 ADAM32Q8TC27 787 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 ENKURQ8TC29 256 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 SLC7A8Q9UHI5 535 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CENPXA8MT69 81 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 GLUD2P49448 558 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 POLR2LP62875 67 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 PLD1Q13393 1074 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CAMK2GQ13555 558 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZNF284Q2VY69 593 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 PDZK1Q5T2W1 519 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 ANKRD22Q5VYY1 191 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CDC73Q6P1J9 531 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 FAM92BQ6ZTR7 304 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 HPS6Q86YV9 775 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 GLOD4Q9HC38 313 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 MAN1C1Q9NR34 630 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CRYL1Q9Y2S2 319 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CALCAP01258 141 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 PABPC1P11940 636 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 JOSD2Q8TAC2 188 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 P2RX7Q99572 595 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 PRKAG2Q9UGJ0 569 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 PTBP2Q9UKA9 531 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 MT-CO1P00395 513 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 KIAA1217Q5T5P2 1943 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CCDC80Q76M96 950 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 DAW1Q8N136 415 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CPSF7Q8N684 471 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 AP3S1Q92572 193 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 NUAK2Q9H093 628 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 IFT80Q9P2H3 777 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 RAPGEFL1Q9UHV5 662 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 TEX264Q9Y6I9 313 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 SLC7A1P30825 629 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 MAGEA10P43363 369 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 MFSD10Q14728 455 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 ACAP2Q15057 778 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 PABPC1LQ4VXU2 614 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CMC1Q7Z7K0 106 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 KIAA0319LQ8IZA0 1049 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CYP4X1Q8N118 509 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 MINDY2Q8NBR6 621 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 TRAPPC12Q8WVT3 735 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 ELMO3Q96BJ8 720 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 PLEKHG4BQ96PX9 1271 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 OSBPL10Q9BXB5 764 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 PRG3Q9Y2Y8 225 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 GBE1Q04446 702 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 MIEF1Q9NQG6 463 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 BCORQ6W2J9 1755 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CBX4O00257 560 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 PLK4O00444 970 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CCNT2O60583 730 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 ITIH5Q86UX2 942 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 DCAKDQ8WVC6 231 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 KCTD4Q8WVF5 259 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 ASB9Q96DX5 294 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 TEKT5Q96M29 485 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 GLT1D1Q96MS3 346 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 C2orf49Q9BVC5 232 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 NOL11Q9H8H0 719 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 GALNT8Q9NY28 637 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 LCP2Q13094 533 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CNPY1Q3B7I2 92 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 ARL13AQ5H913 290 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 WSCD1Q658N2 575 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 TIFABQ6ZNK6 161 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 PLSCR1O15162 318 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CDC42P60953 191 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 CSNK2BP67870 215 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 RIBC2Q9H4K1 309 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 MAGEE1Q9HCI5 957 aa11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 SUCOQ9UBS9 1254 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 ABT1Q9ULW3 272 aaKnown RBP11.85□□□□□ -0.51
CDC42BPA-202ENST00000366764 SLC15A5A6NIM6 579 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 OR56A5P0C7T3 313 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 AQP4P55087 323 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 CEP78Q5JTW2 689 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 CREB1P16220 341 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 BNC1Q01954 994 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 ACSM2AQ08AH3 577 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 ACSM2BQ68CK6 577 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 NUSAP1Q9BXS6 441 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 SLC25A13Q9UJS0 675 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 CSDE1O75534 798 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 ADORA2AP29274 412 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 TFAP2DQ7Z6R9 452 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 UTP15Q8TED0 518 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 MTERF3Q96E29 417 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 LENG8Q96PV6 779 aaPredicted RBP11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 AAASQ9NRG9 546 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 FNIP2Q9P278 1114 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 UGT2B11O75310 529 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 PIAS1O75925 651 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms