RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 CATSPERBQ9H7T0 1116 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 MARCH2Q9P0N8 246 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 NUDT5Q9UKK9 219 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 NEU3Q9UQ49 428 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 PLAAQ9Y263 795 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 STARD13Q9Y3M8 1113 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 MFHAS1Q9Y4C4 1052 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 SNX10Q9Y5X0 201 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 NFS1Q9Y697 457 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 AK5Q9Y6K8 562 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 NYNRINQ9P2P1 1898 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 TDRD6O60522 2096 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 AHCTF1Q8WYP5 2266 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 A0A1B0GVT2 93 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 E2F8A0AVK6 867 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 WASH3PC4AMC7 463 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 PRRT4C9JH25 899 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 GOLGA8KD6RF30 607 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 H3BQF6 201 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 EIF3HO15372 352 aaKnown RBP eCLIP11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 HOXC11O43248 304 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 MTSS1O43312 755 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 TLR5O60602 858 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 STK10O94804 968 aaKnown RBP11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 OAS2P29728 719 aaKnown RBP11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 GRK6P43250 576 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 CXADRP78310 365 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 SRSF1Q07955 248 aaKnown RBP eCLIP11.41□□□□□ -0.581e-6■□□□□ 11.3
CSNK1E-202ENST00000366216 GALNT2Q10471 571 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 TAF1BQ53T94 588 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 DENND2CQ68D51 928 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 TMEM25Q86YD3 366 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 C1orf216Q8TAB5 229 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 SNIP1Q8TAD8 396 aaKnown RBP11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 HTR3CQ8WXA8 447 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 HDAC11Q96DB2 347 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 OTUB2Q96DC9 234 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 BTN2A3PQ96KV6 586 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 GPR174Q9BXC1 333 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 FRMD8Q9BZ67 464 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 KLC2Q9H0B6 622 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 OCEL1Q9H607 264 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 DONSONQ9NYP3 566 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 WSB2Q9NYS7 404 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 PPARGC1AQ9UBK2 798 aaKnown RBP11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 HS3ST4Q9Y661 456 aa11.41□□□□□ -0.58
CSNK1E-202ENST00000366216 SLC12A8A0AV02 714 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 METTL12A8MUP2 240 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 B8ZZF3 427 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 RIPK2O43353 540 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 GREM1O60565 184 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 MAP3K6O95382 1288 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 TTC4O95801 387 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 TBX18O95935 607 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 MBL2P11226 248 aaPredicted RBP11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 JUPP14923 745 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 VAV1P15498 845 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 ATP5C1P36542 298 aaKnown RBP11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 COG7P83436 770 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 TLE3Q04726 772 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 PPIDQ08752 370 aaKnown RBP11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 KCNJ11Q14654 390 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 HECTD3Q5T447 861 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 PIK3R6Q5UE93 754 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 NUGGCQ68CJ6 796 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 PPP1R21Q6ZMI0 780 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 CENPUQ71F23 418 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 CROCCP2Q86T23 111 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 CCDC25Q86WR0 208 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 BBS7Q8IWZ6 715 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 ZNF683Q8IZ20 524 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 GOLGA6L1Q8N7Z2 621 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 WBP1Q96G27 269 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 SPATA13Q96N96 652 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 RBM15Q96T37 977 aaKnown RBP eCLIP11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 TMEM109Q9BVC6 243 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 SIK2Q9H0K1 926 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 CDC42EP4Q9H3Q1 356 aaKnown RBP11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 CCSER2Q9H7U1 834 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 USP36Q9P275 1121 aaKnown RBP11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 FTSJ1Q9UET6 329 aa11.4□□□□□ -0.58
CSNK1E-202ENST00000366216 IGLV3-10A0A075B6K4 115 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 E7ESA3 106 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 ALOX15BO15296 676 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 UTP20O75691 2785 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 WISP1O95388 367 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 MOCS2O96007 188 aaPredicted RBP11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 ABHD2P08910 425 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 FDFT1P37268 417 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 GARSP41250 739 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 MAGEA4P43358 317 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 CSNK1EP49674 416 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 AFF3P51826 1226 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 ARL4CP56559 192 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 BASP1P80723 227 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 AP1B1Q10567 949 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 SLC29A2Q14542 456 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 RTP5Q14D33 572 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 HIF1AQ16665 826 aa11.39□□□□□ -0.59
CSNK1E-202ENST00000366216 ANO4Q32M45 955 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms