RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 CPED1A4D0V7 1026 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 MAGEA13PA6NCF6 341 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 TEX22C9J3V5 150 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 NPIPB11E5RHQ5 1161 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 WNT9BO14905 357 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 KRT86O43790 486 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 GAGE7O76087 117 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 IGKV3-20P01619 116 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 GAGE12FP0CL80 117 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 GAGE12GP0CL81 117 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 GAGE12IP0CL82 117 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 HSD3B1P14060 373 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 ITGAXP20702 1163 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 CHATP28329 748 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 PSMC2P35998 433 aaKnown RBP4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 POU5F1BQ06416 359 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 GAGE1Q13065 139 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 GAGE4Q13068 117 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 KRT81Q14533 505 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 TAF11Q15544 211 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 ZNF766Q5HY98 468 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 LRRC8DQ7L1W4 858 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 PLD5Q8N7P1 536 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 SNAPC3Q92966 411 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 SIN3AQ96ST3 1273 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 CSF3RQ99062 836 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 NOX4Q9NPH5 578 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 SLCO3A1Q9UIG8 710 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 DGKBQ9Y6T7 804 aa4.15□□□□□ -1.75
RNU6-553P-201ENST00000364047 KLK8O60259 260 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 KDM4BO94953 1096 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 URODP06132 367 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 GALTP07902 379 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 CD58P19256 250 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 GPTP24298 496 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 CNTFP26441 200 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 CDH15P55291 814 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 DLX5P56178 289 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 EFNB3Q15768 340 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 ZNF628Q5EBL2 1059 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 TMEM81Q6P7N7 255 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 TMTC1Q8IUR5 882 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 RFLNBQ8N5W9 214 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 C11orf65Q8NCR3 313 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 CREB3L4Q8TEY5 395 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 ZNF385AQ96PM9 386 aaKnown RBP4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 BBS4Q96RK4 519 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 PKP4Q99569 1192 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 GPR63Q9BZJ6 419 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 BEX4Q9NWD9 120 aaPredicted RBP4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 TMEM160Q9NX00 188 aa4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.14□□□□□ -1.75
RNU6-553P-201ENST00000364047 A0A087WYN8 130 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 BCAT2O15382 392 aaPredicted RBP4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 TACC1O75410 805 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 KRT36O76013 467 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 CLDN14O95500 239 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 PMS2P2O95744 297 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 F7P08709 466 aaPredicted RBP4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 IFIT1P09914 478 aaKnown RBP4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 ETFAP13804 333 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 HNRNPH1P31943 449 aaKnown RBP4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 ECT2LQ008S8 904 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 NEDD9Q14511 834 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 AMZ1Q400G9 498 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 MMEL1Q495T6 779 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 ATP13A5Q4VNC0 1218 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 PPP6R3Q5H9R7 873 aaPredicted RBP4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 NOXA1Q86UR1 476 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 POC1AQ8NBT0 407 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 SCCPDHQ8NBX0 429 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 SPATA20Q8TB22 786 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 NEK9Q8TD19 979 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 WFIKKN2Q8TEU8 576 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 FBXL8Q96CD0 374 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 MAELQ96JY0 434 aaKnown RBP4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 UBXN10Q96LJ8 280 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 C3orf30Q96M34 536 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 HEMGNQ9BXL5 484 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 DONSONQ9NYP3 566 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 SMARCAL1Q9NZC9 954 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 ZNF224Q9NZL3 707 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 NFE2L3Q9Y4A8 694 aa4.13□□□□□ -1.75
RNU6-553P-201ENST00000364047 NDUFS7O75251 213 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 HEXAP06865 529 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 STX2P32856 288 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 CCT5P48643 541 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 EFNA5P52803 228 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 GRIK3Q13003 919 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 BIRC3Q13489 604 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 TNFAIP1Q13829 316 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 ZRSR1Q15695 479 aaKnown RBP4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 UNQ6126/PRO20091Q6UXV3 157 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 CYP26C1Q6V0L0 522 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 B3GNT6Q6ZMB0 384 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 RRM2BQ7LG56 351 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 ZNF329Q86UD4 541 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 NAGSQ8N159 534 aa4.12□□□□□ -1.75
RNU6-553P-201ENST00000364047 AGBL3Q8NEM8 1001 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms