RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 SLITRK1Q96PX8 696 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 SLF1Q9BQI6 1058 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 MXRA8Q9BRK3 442 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 SCAND2PQ9GZW5 306 aaPredicted RBP3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 TKTL2Q9H0I9 626 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 RIOX1Q9H6W3 641 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 MORF4L1Q9UBU8 362 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 CNOT8Q9UFF9 292 aaKnown RBP3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 COX11Q9Y6N1 276 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 A3GALT2U3KPV4 340 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 WDR33Q9C0J8 1336 aaKnown RBP3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 TLR2O60603 784 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 ATG13O75143 517 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 NDUFS3O75489 264 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 SLC25A12O75746 678 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 CLDN7O95471 211 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 FSHBP01225 129 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 DNTTP04053 509 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 RB1P06400 928 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 KRT10P13645 584 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 ETFAP13804 333 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 GCH1P30793 250 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 DCTDP32321 178 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 EIF2DP41214 584 aaKnown RBP3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 CLCN5P51795 746 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 FAM27E3Q08E93 113 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 LPIN1Q14693 890 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 ASTE1Q2TB18 679 aaPredicted RBP3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 USP41Q3LFD5 358 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 ESCO2Q56NI9 601 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 SGO1Q5FBB7 561 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 C6orf141Q5SZD1 244 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 PLEKHA7Q6IQ23 1121 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 HMBOX1Q6NT76 420 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 TMEM71Q6P5X7 295 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 ZNF793Q6ZN11 406 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 TRILQ7L0X0 811 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 PRIMA1Q86XR5 153 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 FAM217AQ8IXS0 508 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 HORMAD2Q8N7B1 307 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 TEX45Q8NA69 505 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 JAKMIP2Q96AA8 810 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 FBXL8Q96CD0 374 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 ZC3HAV1LQ96H79 300 aaKnown RBP3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 NCAPGQ9BPX3 1015 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 C1QTNF5Q9BXJ0 243 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 TXLNGYQ9BZA5 131 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 KLHL31Q9H511 634 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 MAGEE1Q9HCI5 957 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 RANGRFQ9HD47 186 aaPredicted RBP3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 BPIFA1Q9NP55 256 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 FBXL17Q9UF56 701 aa3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 TTBK1Q5TCY1 1321 aaPredicted RBP3.88□□□□□ -1.79
RNU6-28P-201ENST00000362378 SYNDIG1LA6NDD5 238 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 GAGE12JA6NER3 117 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 A6NNC1 897 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 ZNF814B7Z6K7 855 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 E5RJQ4 531 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 SH2B2O14492 632 aaPredicted RBP3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 ENTPD3O75355 529 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 RBMXL2O75526 392 aaKnown RBP3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 NKX2-2O95096 273 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 CSPG5O95196 566 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 NUDT3O95989 172 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 IFNA2P01563 188 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 MMP2P08253 660 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 CLTBP09497 229 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 ZNF182P17025 639 aaPredicted RBP3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 RRM1P23921 792 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 MPGP29372 298 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 ZNF91Q05481 1191 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 ADIPOQQ15848 244 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 CCDC96Q2M329 555 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 SOWAHAQ2M3V2 549 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 FAM133BQ5BKY9 247 aaKnown RBP3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 PRAMEF19Q5SWL8 479 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 PMS2CLQ68D20 193 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 KIAA0930Q6ICG6 404 aaPredicted RBP3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 HEPHL1Q6MZM0 1159 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 NAA16Q6N069 864 aaPredicted RBP3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 CES5AQ6NT32 575 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 LCTLQ6UWM7 567 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 QSOX2Q6ZRP7 698 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 LINGO2Q7L985 606 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 RD3Q7Z3Z2 195 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 ADGRA1Q86SQ6 560 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 NOXA1Q86UR1 476 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 ADGRG3Q86Y34 549 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 GPSM1Q86YR5 675 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 CAMK1DQ8IU85 385 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 WDR63Q8IWG1 891 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 SCML4Q8N228 414 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 POC5Q8NA72 575 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 SLC16A11Q8NCK7 471 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 CEP76Q8TAP6 659 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 TMEM163Q8TC26 289 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 TMEM18Q96B42 140 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 SLC41A2Q96JW4 573 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 OR2A14Q96R47 310 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 SEPT5Q99719 369 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms