RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 KYAT1Q16773 422 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 C6orf10Q5SRN2 563 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 TMEM207Q6UWW9 146 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 TFAP2DQ7Z6R9 452 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 DPP9Q86TI2 863 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 CUZD1Q86UP6 607 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 OR52K2Q8NGK3 314 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 NUDT8Q8WV74 236 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 ZNF560Q96MR9 790 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 KIFC1Q9BW19 673 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 SLC39A8Q9C0K1 460 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 TMLHEQ9NVH6 421 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 PTTG2Q9NZH5 202 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 NCKIPSDQ9NZQ3 722 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 CNOT6Q9ULM6 557 aaKnown RBP10.65□□□□□ -0.7
SMC3-201ENST00000361804 USP22Q9UPT9 525 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 TRIM38O00635 465 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 CDH2P19022 906 aaPredicted RBP10.65□□□□□ -0.7
SMC3-201ENST00000361804 ECT2LQ008S8 904 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 TMED1Q13445 227 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 PRPSAP1Q14558 356 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 GPR158Q5T848 1215 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 SDHAF4Q5VUM1 108 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 CHERPQ8IWX8 916 aaKnown RBP10.65□□□□□ -0.7
SMC3-201ENST00000361804 TRIML2Q8N7C3 387 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 GPRC5AQ8NFJ5 357 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 ADCY4Q8NFM4 1077 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 TSPAN14Q8NG11 270 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 NSUN5Q96P11 429 aaKnown RBP10.65□□□□□ -0.7
SMC3-201ENST00000361804 VTA1Q9NP79 307 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 FBXO5Q9UKT4 447 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 PHF24Q9UPV7 400 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 CASP8AP2Q9UKL3 1982 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 PSMD12O00232 456 aaPredicted RBP10.65□□□□□ -0.7
SMC3-201ENST00000361804 TADA2AO75478 443 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 CTSHP09668 335 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 ALDOCP09972 364 aaKnown RBP10.65□□□□□ -0.7
SMC3-201ENST00000361804 NPY2RP49146 381 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 LRP8Q14114 963 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 TRIM25Q14258 630 aaKnown RBP10.65□□□□□ -0.7
SMC3-201ENST00000361804 SV2CQ496J9 727 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 IFNEQ86WN2 208 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 ARHGAP12Q8IWW6 846 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 FAM47BQ8NA70 645 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 MRPS26Q9BYN8 205 aaKnown RBP10.65□□□□□ -0.7
SMC3-201ENST00000361804 SLC2A11Q9BYW1 496 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 MRPL46Q9H2W6 279 aaKnown RBP10.65□□□□□ -0.7
SMC3-201ENST00000361804 Q9H521 79 aa10.65□□□□□ -0.7
SMC3-201ENST00000361804 UBDO15205 165 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 AKAP10O43572 662 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 SUPT7LO94864 414 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 TFPTP0C1Z6 253 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 CPB1P15086 417 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 ARSDP51689 593 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 HPCAP84074 193 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 PLOD1Q02809 727 aaPredicted RBP10.65□□□□□ -0.71
SMC3-201ENST00000361804 VPS26BQ4G0F5 336 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 NAPEPLDQ6IQ20 393 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 C14orf80Q86SX3 495 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 OFCC1Q8IZS5 231 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 AHI1Q8N157 1196 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 PELI3Q8N2H9 469 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 DCBLD1Q8N8Z6 715 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 CCDC28BQ9BUN5 200 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 FSD1LQ9BXM9 530 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 MUC3BQ9H195 1237 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 ZNF696Q9H7X3 374 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 RBM22Q9NW64 420 aaKnown RBP eCLIP10.65□□□□□ -0.71
SMC3-201ENST00000361804 MARCH4Q9P2E8 410 aaPredicted RBP10.65□□□□□ -0.71
SMC3-201ENST00000361804 EBF1Q9UH73 591 aa10.65□□□□□ -0.71
SMC3-201ENST00000361804 PLXNA4Q9HCM2 1894 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 PRUNE2Q8WUY3 3088 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 DMDP11532 3685 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 MRASO14807 208 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 B4GALT3O60512 393 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 CD4P01730 458 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 LRPAP1P30533 357 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 YAP1P46937 504 aaKnown RBP10.64□□□□□ -0.71
SMC3-201ENST00000361804 CDKN2DP55273 166 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 ITKQ08881 620 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 MYBPC3Q14896 1274 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 SPPL2CQ8IUH8 684 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 TINF2Q9BSI4 451 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 OLAHQ9NV23 265 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 EVLQ9UI08 416 aaPredicted RBP10.64□□□□□ -0.71
SMC3-201ENST00000361804 BTRCQ9Y297 605 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 WDFY3Q8IZQ1 3526 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 NR5A2O00482 541 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 GPC4O75487 556 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 OXTRP30559 389 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 SCNN1AP37088 669 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 BRCC3P46736 316 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 SLC12A2P55011 1212 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 PCID2Q5JVF3 399 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 ITPRIPL1Q6GPH6 555 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 SCIMPQ6UWF3 145 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 CHSY3Q70JA7 882 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 FASTKD5Q7L8L6 764 aaKnown RBP10.64□□□□□ -0.71
SMC3-201ENST00000361804 ANKRD23Q86SG2 305 aa10.64□□□□□ -0.71
SMC3-201ENST00000361804 FUNDC1Q8IVP5 155 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms