RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 SAMSN1Q9NSI8 373 aaKnown RBP21.3■■□□□ 1
CD47-202ENST00000361309 LHX3Q9UBR4 397 aa21.3■■□□□ 1
CD47-202ENST00000361309 KLQ9UEF7 1012 aa21.3■■□□□ 1
CD47-202ENST00000361309 OR1A2Q9Y585 309 aa21.3■■□□□ 1
CD47-202ENST00000361309 TLN1Q9Y490 2541 aaKnown RBP21.29■■□□□ 1
CD47-202ENST00000361309 RASA4BC9J798 803 aa21.29■■□□□ 1
CD47-202ENST00000361309 RASA4O43374 803 aa21.29■■□□□ 1
CD47-202ENST00000361309 NOBOXO60393 691 aa21.29■■□□□ 1
CD47-202ENST00000361309 KRT3P12035 628 aa21.29■■□□□ 1
CD47-202ENST00000361309 ERCC5P28715 1186 aaPredicted RBP21.29■■□□□ 1
CD47-202ENST00000361309 SUOXP51687 545 aa21.29■■□□□ 1
CD47-202ENST00000361309 SRSF6Q13247 344 aaKnown RBP21.29■■□□□ 1
CD47-202ENST00000361309 CYTH1Q15438 398 aa21.29■■□□□ 1
CD47-202ENST00000361309 UGP2Q16851 508 aa21.29■■□□□ 1
CD47-202ENST00000361309 SLFN11Q7Z7L1 901 aa21.29■■□□□ 1
CD47-202ENST00000361309 TMEM74Q96NL1 305 aa21.29■■□□□ 1
CD47-202ENST00000361309 GANQ9H2C0 597 aa21.29■■□□□ 1
CD47-202ENST00000361309 SUV39H2Q9H5I1 410 aa21.29■■□□□ 1
CD47-202ENST00000361309 PCDH12Q9NPG4 1184 aa21.29■■□□□ 1
CD47-202ENST00000361309 DAAM1Q9Y4D1 1078 aa21.29■■□□□ 1
CD47-202ENST00000361309 CYSRT1A8MQ03 144 aa21.28■■□□□ 1
CD47-202ENST00000361309 PCCBP05166 539 aa21.28■■□□□ 1
CD47-202ENST00000361309 GPD1P21695 349 aa21.28■■□□□ 1
CD47-202ENST00000361309 CCKBRP32239 447 aa21.28■■□□□ 1
CD47-202ENST00000361309 RFC1P35251 1148 aaPredicted RBP21.28■■□□□ 1
CD47-202ENST00000361309 YBEYP58557 167 aaPredicted RBP21.28■■□□□ 1
CD47-202ENST00000361309 PTP4A2Q12974 167 aa21.28■■□□□ 1
CD47-202ENST00000361309 SERINC3Q13530 473 aa21.28■■□□□ 1
CD47-202ENST00000361309 LINC00303Q3SY05 128 aa21.28■■□□□ 1
CD47-202ENST00000361309 TCP11X2Q5H9J9 407 aa21.28■■□□□ 1
CD47-202ENST00000361309 KCTD16Q68DU8 428 aa21.28■■□□□ 1
CD47-202ENST00000361309 USP53Q70EK8 1073 aa21.28■■□□□ 1
CD47-202ENST00000361309 PRICKLE2Q7Z3G6 844 aa21.28■■□□□ 1
CD47-202ENST00000361309 OR6C4Q8NGE1 309 aa21.28■■□□□ 1
CD47-202ENST00000361309 HCAR2Q8TDS4 363 aa21.28■■□□□ 1
CD47-202ENST00000361309 WDR92Q96MX6 357 aa21.28■■□□□ 1
CD47-202ENST00000361309 PISDQ9UG56 409 aa21.28■■□□□ 1
CD47-202ENST00000361309 ACSL6Q9UKU0 697 aa21.28■■□□□ 1
CD47-202ENST00000361309 TSPAN11A1L157 253 aa21.27■■□□□ 1
CD47-202ENST00000361309 AGRPO00253 132 aa21.27■■□□□ 1
CD47-202ENST00000361309 WISP1O95388 367 aa21.27■■□□□ 1
CD47-202ENST00000361309 TNFP01375 233 aa21.27■■□□□ 1
CD47-202ENST00000361309 JMJD7P0C870 316 aa21.27■■□□□ 1
CD47-202ENST00000361309 UNGP13051 313 aaPredicted RBP21.27■■□□□ 1
CD47-202ENST00000361309 KLK7P49862 253 aa21.27■■□□□ 1
CD47-202ENST00000361309 LIG3P49916 1009 aa21.27■■□□□ 1
CD47-202ENST00000361309 NFATC3Q12968 1075 aa21.27■■□□□ 1
CD47-202ENST00000361309 EFHC2Q5JST6 749 aa21.27■■□□□ 1
CD47-202ENST00000361309 SCYL2Q6P3W7 929 aa21.27■■□□□ 1
CD47-202ENST00000361309 WDR59Q6PJI9 974 aa21.27■■□□□ 1
CD47-202ENST00000361309 DNAAF5Q86Y56 855 aa21.27■■□□□ 1
CD47-202ENST00000361309 CCNJLQ8IV13 435 aa21.27■■□□□ 1
CD47-202ENST00000361309 Q8N9G6 341 aaPredicted RBP21.27■■□□□ 1
CD47-202ENST00000361309 GPR156Q8NFN8 814 aa21.27■■□□□ 1
CD47-202ENST00000361309 ATL2Q8NHH9 583 aa21.27■■□□□ 1
CD47-202ENST00000361309 SGF29Q96ES7 293 aa21.27■■□□□ 1
CD47-202ENST00000361309 PDXPQ96GD0 296 aa21.27■■□□□ 1
CD47-202ENST00000361309 RBM15Q96T37 977 aaKnown RBP eCLIP21.27■■□□□ 1
CD47-202ENST00000361309 SELENOOQ9BVL4 669 aa21.27■■□□□ 1
CD47-202ENST00000361309 TAB2Q9NYJ8 693 aa21.27■■□□□ 1
CD47-202ENST00000361309 ADAM22Q9P0K1 906 aa21.27■■□□□ 1
CD47-202ENST00000361309 LOXL2Q9Y4K0 774 aa21.27■■□□□ 1
CD47-202ENST00000361309 CREB3O43889 395 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 PRKCGP05129 697 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 SOX5P35711 763 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 POLR2FP61218 127 aaKnown RBP21.26■□□□□ 0.99
CD47-202ENST00000361309 MTM1Q13496 603 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 AGERQ15109 404 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 PARP15Q460N3 678 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 ERAP2Q6P179 960 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 TRIM72Q6ZMU5 477 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 PLA2G15Q8NCC3 412 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 PCDHB18PQ96TA0 734 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 FAM117AQ9C073 453 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 NLRC4Q9NPP4 1024 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 UBA2Q9UBT2 640 aaPredicted RBP21.26■□□□□ 0.99
CD47-202ENST00000361309 DACH1Q9UI36 760 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 DGKBQ9Y6T7 804 aa21.26■□□□□ 0.99
CD47-202ENST00000361309 WASH4PA8MWX3 477 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 NVLO15381 856 aaKnown RBP21.25■□□□□ 0.99
CD47-202ENST00000361309 CCP110O43303 1012 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 BUB1BO60566 1050 aaPredicted RBP21.25■□□□□ 0.99
CD47-202ENST00000361309 LIPCP11150 499 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 ITIH1P19827 911 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 MMP12P39900 470 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 NSFP46459 744 aaKnown RBP21.25■□□□□ 0.99
CD47-202ENST00000361309 GSCP56915 257 aaPredicted RBP21.25■□□□□ 0.99
CD47-202ENST00000361309 JAM2P57087 298 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 GRM3Q14832 879 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 CFAP58Q5T655 872 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 ZSWIM9Q86XI8 627 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 SFTPA2Q8IWL1 248 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 UMODL1-AS1Q8N2C9 162 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 OR1E3Q8WZA6 343 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 EXTL1Q92935 676 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 ZNF641Q96N77 438 aaPredicted RBP21.25■□□□□ 0.99
CD47-202ENST00000361309 CLSTN2Q9H4D0 955 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 CATSPERBQ9H7T0 1116 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 FAM207AQ9NSI2 230 aaPredicted RBP21.25■□□□□ 0.99
CD47-202ENST00000361309 APPL1Q9UKG1 709 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms