RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 OGFOD2Q6N063 350 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 PDSS2Q86YH6 399 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 SVOPLQ8N434 492 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 C12orf50Q8NA57 414 aaPredicted RBP8.81□□□□□ -1
COL6A6-201ENST00000358511 KAT5Q92993 513 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 MAGEB10Q96LZ2 347 aaPredicted RBP8.81□□□□□ -1
COL6A6-201ENST00000358511 FAM53CQ9NYF3 392 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 CRYL1Q9Y2S2 319 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 TTLL13PA6NNM8 815 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 KLRC4O43908 158 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 ALDH1A1P00352 501 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 PRG2P13727 222 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 CYP2A7P20853 494 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 SLC41A1Q8IVJ1 513 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 ALG2Q9H553 416 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 MRPS7Q9Y2R9 242 aaKnown RBP8.81□□□□□ -1
COL6A6-201ENST00000358511 DIP2BQ9P265 1576 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 SLC25A24Q6NUK1 477 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 C10orf82Q8WW14 230 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 SIPA1Q96FS4 1042 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 PPP3R2Q96LZ3 170 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 A0A0J9YYE9 177 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 A0A1W2PPM1 405 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 F5H5T6 163 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 FBP2O00757 339 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 CASKO14936 926 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 COX7A2P14406 83 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 ERCC2P18074 760 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 OLFML2AQ68BL7 652 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 LNX1Q8TBB1 728 aaPredicted RBP8.81□□□□□ -1
COL6A6-201ENST00000358511 ZNF670Q9BS34 389 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 INTS10Q9NVR2 710 aaKnown RBP8.81□□□□□ -1
COL6A6-201ENST00000358511 ABCG2Q9UNQ0 655 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 A0A0X1KG70 313 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 TXNP10599 105 aaKnown RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 ARF4P18085 180 aaPredicted RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 ZNF143P52747 638 aaPredicted RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 CRADDP78560 199 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 ZNF829Q3KNS6 432 aaPredicted RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 MARC1Q5VT66 337 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 FAM220AQ7Z4H9 259 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 ZNF420Q8TAQ5 688 aaPredicted RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 RBM22Q9NW64 420 aaKnown RBP eCLIP8.8□□□□□ -1
COL6A6-201ENST00000358511 XRN1Q8IZH2 1706 aaKnown RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 EFCAB9A8MZ26 197 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 H0Y858 1186 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 TBX1O43435 398 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 TCEA3O75764 348 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 PORP16435 677 aaPredicted RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 KLF10Q13118 480 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 FAM92BQ6ZTR7 304 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 BBS12Q6ZW61 710 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 ARMC8Q8IUR7 673 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 PSTKQ8IV42 348 aaKnown RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 DMRTB1Q96MA1 342 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 USP21Q9UK80 565 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 KCNK1O00180 336 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 NDUFS2O75306 463 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 APOL3O95236 402 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 TIE1P35590 1138 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 CLCN5P51795 746 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 BAATQ14032 418 aaPredicted RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 NEPROQ6NW34 567 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 LLGL2Q6P1M3 1020 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 AHSA2Q719I0 299 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 LRRC57Q8N9N7 239 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 EFHD2Q96C19 240 aaPredicted RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 AXIN1O15169 862 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 RPL22P35268 128 aaKnown RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 UGT2B15P54855 530 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 SPIBQ01892 262 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 MTA1Q13330 715 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 PLEKHG6Q3KR16 790 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 HAVCR1Q96D42 359 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 FSCN2O14926 492 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 SUV39H1O43463 412 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 MPZL2O60487 215 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 ERN1O75460 977 aaKnown RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 NFICP08651 508 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 TPH1P17752 444 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 EIF2S3P41091 472 aaKnown RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 CRATP43155 626 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 SPP2Q13103 211 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 PCID2Q5JVF3 399 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 PPM1LQ5SGD2 360 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 CNSTQ6PJW8 725 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 PTCHD4Q6ZW05 846 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 ILDR2Q71H61 639 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 ENDOVQ8N8Q3 282 aaKnown RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 ZNF317Q96PQ6 595 aaPredicted RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 SLC22A4Q9H015 551 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 UNC93B1Q9H1C4 597 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 TPK1Q9H3S4 243 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 CCDC177Q9NQR7 707 aaPredicted RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 PCDHGC3Q9UN70 934 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 CFL2Q9Y281 166 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 IFNA16P05015 189 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 UGT2B4P06133 528 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 HMBSP08397 361 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms