RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 LIPMQ5VYY2 423 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 APLFQ8IW19 511 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 UTP15Q8TED0 518 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 LINGO1Q96FE5 620 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 PTPRHQ9HD43 1115 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 GTF2IRD1Q9UHL9 959 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 GPN3Q9UHW5 284 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 CAB39Q9Y376 341 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 MDM4O15151 490 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 SH3BGRLO75368 114 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 RPP40O75818 363 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 ATG7O95352 703 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 PAICSP22234 425 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 LRPAP1P30533 357 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 GRIA4P48058 902 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 CCR4P51679 360 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 C16orf46Q6P387 395 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 SETD9Q8NE22 299 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 FBXO5Q9UKT4 447 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 KCPQ6ZWJ8 1503 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 TPSB2P20231 275 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 CCNCP24863 283 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 MARCKSL1P49006 195 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 PCYT1AP49585 367 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 NOMO1Q15155 1222 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 TPSAB1Q15661 275 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 DNAJC14Q6Y2X3 702 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 FAM124AQ86V42 546 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 EFCAB3Q8N7B9 438 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 CENPTQ96BT3 561 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 FUBP3Q96I24 572 aaKnown RBP eCLIP10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 MAGEH1Q9H213 219 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 ZC4H2Q9NQZ6 224 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 SRRDQ9UH36 339 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 PIPSLA2A3N6 862 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 SAC3D1A6NKF1 404 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 C22orf31O95567 290 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 PIRTP0C851 137 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 PTPN9P43378 593 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 PSMD8P48556 350 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 AP5B1Q2VPB7 878 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 WASHC2DQ5SRD0 308 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 TPGS2Q68CL5 300 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 SNX32Q86XE0 403 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 COL26A1Q96A83 441 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 KCTD15Q96SI1 283 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 ADI1Q9BV57 179 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 CHD4Q14839 1912 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 E7ENQ6 273 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 VAV1P15498 845 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 NDST2P52849 883 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 TRIT1Q9H3H1 467 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 NDUFA13Q9P0J0 144 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 POLR1DQ9Y2S0 133 aa10.38□□□□□ -0.75
SPTAN1-201ENST00000358161 GLYATL1P3A0A0U1RQE8 302 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 CCDC159P0C7I6 412 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 UMPSP11172 480 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 HGFP14210 728 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 CRATP43155 626 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 NAGLUP54802 743 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 TOMM20Q15388 145 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 CYP4X1Q8N118 509 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 STK32AQ8WU08 396 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 NELL1Q92832 810 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 GBA3Q9H227 469 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 KCTD5Q9NXV2 234 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 MAP10Q9P2G4 905 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 RPS6KA6Q9UK32 745 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 ASB3Q9Y575 518 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 SLC38A8A6NNN8 435 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 ERN1O75460 977 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 HIST1H2ABP04908 130 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 ATP6V1B1P15313 513 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 PIK3R1P27986 724 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 IL5RAQ01344 420 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 HIST3H2AQ7L7L0 130 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 POMGNT2Q8NAT1 580 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 DQX1Q8TE96 717 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 HIST1H2ACQ93077 130 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 TTLL2Q9BWV7 592 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 GPR88Q9GZN0 384 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 ACSS3Q9H6R3 686 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 PCDHGA4Q9Y5G9 962 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 COLEC10Q9Y6Z7 277 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 BCLAF3A2AJT9 711 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 SPAM1P38567 509 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 GAD2Q05329 585 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 ARHGAP17Q68EM7 881 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 ZNF549Q6P9A3 640 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 SLC4A11Q8NBS3 891 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 STYXQ8WUJ0 223 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 CLP1Q92989 425 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 POP5Q969H6 163 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 NTPCRQ9BSD7 190 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 DDX28Q9NUL7 540 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 VPS4AQ9UN37 437 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 CHKBQ9Y259 395 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 RAI2Q9Y5P3 530 aa10.37□□□□□ -0.75
SPTAN1-201ENST00000358161 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms