RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 OR2T3Q8NH03 318 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 MIPOL1Q8TD10 442 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 ADAMTS16Q8TE57 1224 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 RANBP9Q96S59 729 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 HOPXQ9BPY8 73 aaPredicted RBP17.82■□□□□ 0.44
RTN4-204ENST00000357732 FICDQ9BVA6 458 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 OLAHQ9NV23 265 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 TBC1D13Q9NVG8 400 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 ARHGEF38Q9NXL2 777 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 PLXNB2O15031 1838 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 AQP12BA6NM10 295 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 HTRA2O43464 458 aaPredicted RBP17.82■□□□□ 0.44
RTN4-204ENST00000357732 STX1BP61266 288 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 CYTH1Q15438 398 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 NHSL2Q5HYW2 709 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 NEPROQ6NW34 567 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 BHLHA9Q7RTU4 235 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 AQP12AQ8IXF9 295 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 IPMKQ8NFU5 416 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 L3HYPDHQ96EM0 354 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 SMARCD1Q96GM5 515 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 TCF12Q99081 682 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 PCDHAC1Q9H158 963 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 SLC38A7Q9NVC3 462 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 CNOT6Q9ULM6 557 aaKnown RBP17.82■□□□□ 0.44
RTN4-204ENST00000357732 USP17L7P0C7H9 530 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 HNRNPLP14866 589 aaKnown RBP eCLIP17.81■□□□□ 0.445e-9■■■□□ 16.4
RTN4-204ENST00000357732 LEPRP48357 1165 aaKnown RBP17.81■□□□□ 0.44
RTN4-204ENST00000357732 ATXN3P54252 364 aaPredicted RBP17.81■□□□□ 0.44
RTN4-204ENST00000357732 NUP107P57740 925 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 C1QTNF8P60827 252 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 NFKB2Q00653 900 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 MYBPC3Q14896 1274 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 SNX17Q15036 470 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 MAP7D1Q3KQU3 841 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 MTX3Q5HYI7 312 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 BTBD8Q5XKL5 378 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 RANBP10Q6VN20 620 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 ZBTB49Q6ZSB9 765 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 ERMP1Q7Z2K6 904 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 LRRC43Q8N309 656 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 ZMIZ2Q8NF64 920 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 SPATA22Q8NHS9 363 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 UBXN10Q96LJ8 280 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 FSD1LQ9BXM9 530 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 CATSPERBQ9H7T0 1116 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 CSNK1G1Q9HCP0 422 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 CCDC167Q9P0B6 97 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 FNIP2Q9P278 1114 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 CDH9Q9ULB4 789 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 IPPQ9Y573 584 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 HHLA1C9JL84 531 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 TNPO2O14787 897 aaKnown RBP17.81■□□□□ 0.44
RTN4-204ENST00000357732 IMPDH1P20839 514 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 YY1P25490 414 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 PCSK6P29122 969 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 RABGGTBP53611 331 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 BNIP2Q12982 314 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 BRMS1LQ5PSV4 323 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 KIAA0319Q5VV43 1072 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 LARP4Q71RC2 724 aaKnown RBP eCLIP17.81■□□□□ 0.44
RTN4-204ENST00000357732 LPCAT2Q7L5N7 544 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 TFAP2CQ92754 450 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 CELF6Q96J87 481 aaKnown RBP17.81■□□□□ 0.44
RTN4-204ENST00000357732 PPP1R10Q96QC0 940 aaKnown RBP17.81■□□□□ 0.44
RTN4-204ENST00000357732 CYP2S1Q96SQ9 504 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 ARNT2Q9HBZ2 717 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 CCM2LQ9NUG4 571 aaPredicted RBP17.81■□□□□ 0.44
RTN4-204ENST00000357732 NEU3Q9UQ49 428 aa17.81■□□□□ 0.44
RTN4-204ENST00000357732 TANC1Q9C0D5 1861 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 A0A087WXM4 84 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 MAFKO60675 156 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 PAPSS2O95340 614 aaPredicted RBP17.8■□□□□ 0.44
RTN4-204ENST00000357732 ESRRGP62508 458 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 CSHL1Q14406 222 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 IQSEC1Q6DN90 963 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 CAMK1DQ8IU85 385 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 ARHGAP12Q8IWW6 846 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 TMEM40Q8WWA1 233 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.8■□□□□ 0.446e-7■□□□□ 11.1
RTN4-204ENST00000357732 PCED1BQ96HM7 432 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 SEMA6AQ9H2E6 1030 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 ABCD2Q9UBJ2 740 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 TRAF6Q9Y4K3 522 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 MT-CYBP00156 380 aaPredicted RBP17.8■□□□□ 0.44
RTN4-204ENST00000357732 F2P00734 622 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 SMIM10L2AP0DMW4 78 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 SMIM10L2BP0DMW5 78 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 TTKP33981 857 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 EMP3P54852 163 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 ATP6V0D1P61421 351 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 LPIN1Q14693 890 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 COQ5Q5HYK3 327 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 GPRIN1Q7Z2K8 1008 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 ITFG2Q969R8 447 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 SLC45A3Q96JT2 553 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 SENP8Q96LD8 212 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 MUC13Q9H3R2 512 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 CAAP1Q9H8G2 361 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 CHST12Q9NRB3 414 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms