RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 PFKPQ01813 784 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 EGFLAMQ63HQ2 1017 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 CXXC5Q7LFL8 322 aaKnown RBP11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 WDR49Q8IV35 697 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 TMIEQ8NEW7 156 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 HELQQ8TDG4 1101 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 CXorf40BQ96DE9 158 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 FERD3LQ96RJ6 166 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 SYT15Q9BQS2 421 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 FDXACB1Q9BRP7 624 aaPredicted RBP11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 SEMA6BQ9H3T3 888 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 ACSS3Q9H6R3 686 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 GNPTGQ9UJJ9 305 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 ZNF780BQ9Y6R6 833 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 ROBO2Q9HCK4 1378 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 PTGS2P35354 604 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 NDST1P52848 882 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 ATG9AQ7Z3C6 839 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 NYAP2Q9P242 653 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 MYH8P13535 1937 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 FAM86B1E9PN63 330 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 LOC110117498-PIK3R3F6TDL0 507 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 H0Y858 1186 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 DNAJA2O60884 412 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 IGFALSP35858 605 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 SOX10P56693 466 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 KAT5Q92993 513 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 BMP7P18075 431 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 PRDX6P30041 224 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 FAUP35544 74 aaKnown RBP11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 CDK9P50750 372 aaKnown RBP11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 FAM151AQ8WW52 585 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 PIK3R3Q92569 461 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 SSU72Q9NP77 194 aaKnown RBP11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 PEX16Q9Y5Y5 336 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 CEP152O94986 1710 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 FFAR3O14843 346 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 GPR42O15529 346 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 RARAP10276 462 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 GRIA3P42263 894 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 PPP2R2BQ00005 443 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 CLNKQ7Z7G1 428 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 MCOLN2Q8IZK6 566 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 HM13Q8TCT9 377 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 HOPXQ9BPY8 73 aaPredicted RBP11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 EHD4Q9H223 541 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 BPIFA1Q9NP55 256 aa11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 UXTQ9UBK9 157 aaPredicted RBP11.56□□□□□ -0.56
SPTBN1-202ENST00000356805 KIF20BQ96Q89 1820 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 SCN2BO60939 215 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 SEMA3DO95025 777 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 PRLP01236 227 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 HSD3B2P26439 372 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 TROAPQ12815 778 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 QRFPRQ96P65 431 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 ABCG8Q9H221 673 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 BARX2Q9UMQ3 279 aaPredicted RBP11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 TPP1O14773 563 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 AMPD1P23109 780 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 UGT1A5P35504 534 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 USP46P62068 366 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 RGS1Q08116 209 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 DUPD1Q68J44 220 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 RETSATQ6NUM9 610 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 SLCO6A1Q86UG4 719 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 DNAAF5Q86Y56 855 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 TEX47Q8TBZ9 253 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 TRMOQ9BU70 441 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 VPS4AQ9UN37 437 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 SSR3Q9UNL2 185 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 GMPPBQ9Y5P6 360 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 TCEA1P23193 301 aaKnown RBP11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 ABRAQ8N0Z2 381 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 ATP6V1C2Q8NEY4 427 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 GJD4Q96KN9 370 aaPredicted RBP11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 TKTL2Q9H0I9 626 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 PDLIM1O00151 329 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 HTR3CQ8WXA8 447 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 ALG9Q9H6U8 611 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 SCAMP3O14828 347 aaKnown RBP11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 ENTPD3O75355 529 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 YBX3P16989 372 aaKnown RBP eCLIP11.55□□□□□ -0.561e-7■■■□□ 18.1
SPTBN1-202ENST00000356805 BDNFP23560 247 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 ACSM2AQ08AH3 577 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 HSPA14Q0VDF9 509 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 ACSM2BQ68CK6 577 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 CRAMP1Q96RY5 1269 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 PXMP2Q9NR77 195 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 ANGPT4Q9Y264 503 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 TBC1D30Q9Y2I9 924 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 RAP2CQ9Y3L5 183 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 NCANO14594 1321 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 HECW2Q9P2P5 1572 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 MAGI3Q5TCQ9 1506 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 RLN1P04808 185 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 DGKAP23743 735 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 ARL3P36405 182 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 NFE2Q16621 373 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms