RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 BTBD8Q5XKL5 378 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 CYHR1Q6ZMK1 362 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 KCTD8Q6ZWB6 473 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 ZC3H7AQ8IWR0 971 aaKnown RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 LRRC43Q8N309 656 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 ZBTB8BQ8NAP8 495 aaPredicted RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 OR2T34Q8NGX1 318 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 OR2T3Q8NH03 318 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 RNF34Q969K3 372 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 OSMRQ99650 979 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 MTG1Q9BT17 334 aaPredicted RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 TMEM30AQ9NV96 361 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 GTF2IRD1Q9UHL9 959 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 BTRCQ9Y297 605 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 PCDHGA4Q9Y5G9 962 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 DHRS12A0PJE2 317 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 OR51F1A6NGY5 319 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 ZNF189O75820 626 aaPredicted RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 TOMM70O94826 608 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 LRIG2O94898 1065 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 SNAP29O95721 258 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 ELK4P28324 431 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 POLR2IP36954 125 aaKnown RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 FOXA1P55317 472 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 C21orf59P57076 290 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 ECT2LQ008S8 904 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 ZBED5Q49AG3 693 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 RABL3Q5HYI8 236 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 HABP4Q5JVS0 413 aaKnown RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 PPP4R4Q6NUP7 873 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 SCIMPQ6UWF3 145 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 CATSPER4Q7RTX7 472 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 LZICQ8WZA0 190 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 EMID1Q96A84 441 aaPredicted RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 MAELQ96JY0 434 aaKnown RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 TRNAU1APQ9NX07 287 aaKnown RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 NUDT5Q9UKK9 219 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 CNOT11Q9UKZ1 510 aaKnown RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 MAGED1Q9Y5V3 778 aaPredicted RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 C1orf232A0A0U1RR37 186 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 H3BMM5 538 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 OCM2P0CE71 109 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 OCMP0CE72 109 aaPredicted RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 HSPA1AP0DMV8 641 aaKnown RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 HSPA1BP0DMV9 641 aaKnown RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 ATP5F1P24539 256 aaPredicted RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 CREB5Q02930 508 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 PIGFQ07326 219 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 GRB7Q14451 532 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 SQLEQ14534 574 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 SAMD4BQ5PRF9 694 aaKnown RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 ERMP1Q7Z2K6 904 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 RIOX2Q8IUF8 465 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 DDIASQ8IXT1 998 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 B3GALNT2Q8NCR0 500 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 BPIFB6Q8NFQ5 453 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 BEST2Q8NFU1 509 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 OR52K2Q8NGK3 314 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 TBC1D15Q8TC07 691 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 RDH11Q8TC12 318 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 NUDT8Q8WV74 236 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 IRGQQ8WZA9 623 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 TANKQ92844 425 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 VPS33AQ96AX1 596 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 PLEKHA8Q96JA3 519 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 TEKT5Q96M29 485 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 TKTL2Q9H0I9 626 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 PLEKHA5Q9HAU0 1116 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 TBC1D23Q9NUY8 699 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 UTP6Q9NYH9 597 aaKnown RBP10.19□□□□□ -0.78
PTPRA-203ENST00000356147 TMEM181Q9P2C4 612 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 OR12D3Q9UGF7 316 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 STAP1Q9ULZ2 295 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 ANKRD6Q9Y2G4 727 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 COQ6Q9Y2Z9 468 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 TRAF6Q9Y4K3 522 aa10.19□□□□□ -0.78
PTPRA-203ENST00000356147 A0A0J9YYE9 177 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 KPNA6O60684 536 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 CPB1P15086 417 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 CAPN3P20807 821 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 NPY2RP49146 381 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 BMXP51813 675 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 VGLL4Q14135 290 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 CYP51A1Q16850 503 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 GPR158Q5T848 1215 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 PKN3Q6P5Z2 889 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 PIWIL4Q7Z3Z4 852 aaKnown RBP10.18□□□□□ -0.78
PTPRA-203ENST00000356147 RNF168Q8IYW5 571 aaPredicted RBP10.18□□□□□ -0.78
PTPRA-203ENST00000356147 APPL2Q8NEU8 664 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 OTUD5Q96G74 571 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 TMEM74Q96NL1 305 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 WDR6Q9NNW5 1121 aaKnown RBP10.18□□□□□ -0.78
PTPRA-203ENST00000356147 IGSF5Q9NSI5 407 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 NDFIP2Q9NV92 336 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 MAP10Q9P2G4 905 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 IPO11Q9UI26 975 aaKnown RBP10.18□□□□□ -0.78
PTPRA-203ENST00000356147 ZNF112Q9UJU3 913 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 FBXO5Q9UKT4 447 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 CRYL1Q9Y2S2 319 aa10.18□□□□□ -0.78
PTPRA-203ENST00000356147 FADS3Q9Y5Q0 445 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms