RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 DPEP2Q9H4A9 486 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 GPN2Q9H9Y4 310 aaPredicted RBP16.01■□□□□ 0.15
DDX55-202ENST00000354291 ANLNQ9NQW6 1124 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 TP53TG5Q9Y2B4 290 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 COQ6Q9Y2Z9 468 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 OR1A2Q9Y585 309 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 PCDHGA3Q9Y5H0 932 aa16.01■□□□□ 0.15
DDX55-202ENST00000354291 PRRC2CQ9Y520 2896 aaKnown RBP16.01■□□□□ 0.15
DDX55-202ENST00000354291 ILVBLA1L0T0 632 aa16■□□□□ 0.15
DDX55-202ENST00000354291 GTPBP10A4D1E9 387 aaKnown RBP16■□□□□ 0.15
DDX55-202ENST00000354291 DRGXA6NNA5 263 aa16■□□□□ 0.15
DDX55-202ENST00000354291 THAP12O43422 761 aa16■□□□□ 0.15
DDX55-202ENST00000354291 HSF2BPO75031 334 aa16■□□□□ 0.15
DDX55-202ENST00000354291 GLI1P08151 1106 aa16■□□□□ 0.15
DDX55-202ENST00000354291 COL8A1P27658 744 aa16■□□□□ 0.15
DDX55-202ENST00000354291 ARF5P84085 180 aa16■□□□□ 0.15
DDX55-202ENST00000354291 PDCLQ13371 301 aa16■□□□□ 0.15
DDX55-202ENST00000354291 HLTFQ14527 1009 aaKnown RBP eCLIP16■□□□□ 0.15
DDX55-202ENST00000354291 INPP5AQ14642 412 aa16■□□□□ 0.15
DDX55-202ENST00000354291 TPD52L1Q16890 204 aaPredicted RBP16■□□□□ 0.15
DDX55-202ENST00000354291 EXOC3L4Q17RC7 722 aa16■□□□□ 0.15
DDX55-202ENST00000354291 WSCD2Q2TBF2 565 aa16■□□□□ 0.15
DDX55-202ENST00000354291 KCTD16Q68DU8 428 aa16■□□□□ 0.15
DDX55-202ENST00000354291 RBM15Q96T37 977 aaKnown RBP eCLIP16■□□□□ 0.15
DDX55-202ENST00000354291 NUDT22Q9BRQ3 303 aa16■□□□□ 0.15
DDX55-202ENST00000354291 SLC39A1Q9NY26 324 aa16■□□□□ 0.15
DDX55-202ENST00000354291 APEX2Q9UBZ4 518 aa16■□□□□ 0.15
DDX55-202ENST00000354291 POLQO75417 2590 aa16■□□□□ 0.15
DDX55-202ENST00000354291 FBN2P35556 2912 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 IGHV5-10-1A0A0J9YXX1 117 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 EFCAB7A8K855 629 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 HGSO14964 777 aaPredicted RBP15.99■□□□□ 0.15
DDX55-202ENST00000354291 NUDT21O43809 227 aaKnown RBP15.99■□□□□ 0.15
DDX55-202ENST00000354291 SLC9A1P19634 815 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 GNA15P30679 374 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 USP8P40818 1118 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 MTIF2P46199 727 aaKnown RBP15.99■□□□□ 0.15
DDX55-202ENST00000354291 CDC20Q12834 499 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 MYLK3Q32MK0 819 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 C16orf46Q6P387 395 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 HEATR4Q86WZ0 1026 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 IRF2BP1Q8IU81 584 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 ZNF683Q8IZ20 524 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 NRSN1Q8IZ57 195 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 UNC5BQ8IZJ1 945 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 CCDC112Q8NEF3 446 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 ATL2Q8NHH9 583 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 KIAA1143Q96AT1 154 aaPredicted RBP15.99■□□□□ 0.15
DDX55-202ENST00000354291 CCDC74BQ96LY2 380 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 WDR92Q96MX6 357 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 HAPLN3Q96S86 360 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 PIGVQ9NUD9 493 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 C2CD3Q4AC94 2353 aa15.99■□□□□ 0.15
DDX55-202ENST00000354291 RHPN2P1A8MT19 583 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 K7EM74 188 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 KRT38O76015 456 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 POP4O95707 220 aaKnown RBP15.98■□□□□ 0.15
DDX55-202ENST00000354291 CD160O95971 181 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 MPSTP25325 297 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 OAS2P29728 719 aaKnown RBP15.98■□□□□ 0.15
DDX55-202ENST00000354291 CSTF2P33240 577 aaKnown RBP eCLIP15.98■□□□□ 0.15
DDX55-202ENST00000354291 POLD3Q15054 466 aaPredicted RBP15.98■□□□□ 0.15
DDX55-202ENST00000354291 SPECC1LQ69YQ0 1117 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 CAPRIN2Q6IMN6 1127 aaKnown RBP15.98■□□□□ 0.15
DDX55-202ENST00000354291 GDPD4Q6W3E5 623 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 ZNF783Q6ZMS7 281 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 LEKR1Q6ZMV7 388 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 FAM114A1Q8IWE2 563 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 PLPP6Q8IY26 295 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 DRC7Q8IY82 874 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 EFCAB3Q8N7B9 438 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 ISG20Q96AZ6 181 aaKnown RBP15.98■□□□□ 0.15
DDX55-202ENST00000354291 PDXPQ96GD0 296 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 ASPSCR1Q9BZE9 553 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 ACP6Q9NPH0 428 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 ASNSD1Q9NWL6 643 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 ARHGEF38Q9NXL2 777 aa15.98■□□□□ 0.15
DDX55-202ENST00000354291 LOC101059948A0A1B0GTJ6 334 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 I6L893 689 aaPredicted RBP15.97■□□□□ 0.15
DDX55-202ENST00000354291 SEMA7AO75326 666 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 PCCBP05166 539 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 RNF224P0DH78 156 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 TIMP2P16035 220 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 PON1P27169 355 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 ACVRL1P37023 503 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 MAZP56270 477 aaKnown RBP15.97■□□□□ 0.15
DDX55-202ENST00000354291 RNASE9P60153 205 aaKnown RBP15.97■□□□□ 0.15
DDX55-202ENST00000354291 SNRPD1P62314 119 aaKnown RBP15.97■□□□□ 0.15
DDX55-202ENST00000354291 GNA12Q03113 381 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 PTK2Q05397 1052 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 ATXN7L2Q5T6C5 722 aaPredicted RBP15.97■□□□□ 0.15
DDX55-202ENST00000354291 DCAF12Q5T6F0 453 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 ATP1A1-AS1Q5TC04 95 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 GJB7Q6PEY0 223 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 FAM183BPQ6ZVS7 135 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 FAM129CQ86XR2 697 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 AGBL5Q8NDL9 886 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 OR2AP1Q8NGE2 309 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 OR1E3Q8WZA6 343 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 SHC3Q92529 594 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms