RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 OGFRQ9NZT2 677 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ACAD8Q9UKU7 415 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SUFUQ9UMX1 484 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 LSM4Q9Y4Z0 139 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PCDHGA5Q9Y5G8 931 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PCDHGA1Q9Y5H4 931 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SESN1Q9Y6P5 492 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 DEPDC5O75140 1603 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 MUC3AQ02505 3323 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 MAGI3Q5TCQ9 1506 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 WDR27A2RRH5 827 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 OR6C76A6NM76 312 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 FAM86B1E9PN63 330 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 KLKB1P03952 638 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 FAM86B2P0C5J1 330 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TNFRSF1AP19438 455 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TXNL4AP83876 142 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 UBXN1Q04323 297 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 MST1RQ04912 1400 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SLC18A2Q05940 514 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TFCP2Q12800 502 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TOB2Q14106 344 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SEMA3AQ14563 771 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 VEPH1Q14D04 833 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 C2orf68Q2NKX9 166 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 DPCR1Q3MIW9 517 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TMEM211Q6ICI0 200 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 JADE1Q6IE81 842 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 GLDNQ6ZMI3 551 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 NEK8Q86SG6 692 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 LAS2Q8IYD9 372 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CCDC105Q8IYK2 499 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 SCYL3Q8IZE3 742 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ANKRD13CQ8N6S4 541 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PI4KAP1Q8N8J0 262 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ENDOVQ8N8Q3 282 aaKnown RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 AFAP1L1Q8TED9 768 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF622Q969S3 477 aaKnown RBP eCLIP1.7□□□□□ -2.145e-8■■■□□ 17.3
BRCA1-202ENST00000354071 NXNL1Q96CM4 212 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TUBB6Q9BUF5 446 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 ABHD14AQ9BUJ0 271 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CACNG6Q9BXT2 260 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 C2orf40Q9H1Z8 148 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PIGMQ9H3S5 423 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 TMLHEQ9NVH6 421 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PPP1R14DQ9NXH3 145 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 DLL3Q9NYJ7 618 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 CRNNQ9UBG3 495 aaPredicted RBP1.7□□□□□ -2.14
BRCA1-202ENST00000354071 AMFRQ9UKV5 643 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 A4GNTQ9UNA3 340 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 DTX4Q9Y2E6 619 aa1.7□□□□□ -2.14
BRCA1-202ENST00000354071 PASKQ96RG2 1323 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 DISP2A7MBM2 1401 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 A0A0B4J293 547 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ARHGEF37A1IGU5 675 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 PI4K2BG5E9Z4 385 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 LAMTOR5O43504 91 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 RAD17O75943 681 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 TJP3O95049 919 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 DDAH2O95865 285 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SLC2A4P14672 509 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 CD19P15391 556 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ZFXP17010 805 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 PTAFRP25105 342 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 DDX6P26196 483 aaKnown RBP eCLIP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 HPDP32754 393 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SLC16A2P36021 539 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 EIF2S3P41091 472 aaKnown RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 GPD2P43304 727 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 LIG4P49917 911 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 IL1RL1Q01638 556 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 GOLGA8FQ08AF8 430 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF124Q15973 351 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ZSCAN23Q3MJ62 389 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 C9orf152Q5JTZ5 239 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 PMS2CLQ68D20 193 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF585AQ6P3V2 769 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 FBXO39Q8N4B4 442 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 CFAP61Q8NHU2 1237 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 GRK7Q8WTQ7 553 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 MLST8Q9BVC4 326 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 NUAK2Q9H093 628 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 MAGEE1Q9HCI5 957 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 GIMAP4Q9NUV9 329 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ARHGEF38Q9NXL2 777 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ANAPC2Q9UJX6 822 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 CCL27Q9Y4X3 112 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SIRT4Q9Y6E7 314 aaPredicted RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 COL6A3P12111 3177 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 PIK3C2AO00443 1686 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF536O15090 1300 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 BAHCC1Q9P281 2608 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 GOLGA6L10A0A0M3HER8 536 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 A0A1B0GVM2 712 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 PMS2P1A4D2B8 440 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 PLSCR1O15162 318 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 SLC16A3O15427 465 aaKnown RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 PLPP2O43688 288 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 KINO60870 393 aaKnown RBP1.69□□□□□ -2.14
BRCA1-202ENST00000354071 ATP2C2O75185 946 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms