RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 LRRTM3Q86VH5 581 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 CAND1Q86VP6 1230 aaKnown RBP8.35□□□□□ -1.07
CD44-205ENST00000352818 SPATA2LQ8IUW3 424 aaPredicted RBP8.35□□□□□ -1.07
CD44-205ENST00000352818 ANKMY2Q8IV38 441 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 CYP4X1Q8N118 509 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 IL17RCQ8NAC3 791 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.35□□□□□ -1.07
CD44-205ENST00000352818 DQX1Q8TE96 717 aaKnown RBP8.35□□□□□ -1.07
CD44-205ENST00000352818 HMGB4Q8WW32 186 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 HTR3CQ8WXA8 447 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 SGSM3Q96HU1 749 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 C8orf48Q96LL4 319 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 HSPA12BQ96MM6 686 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 CYTH2Q99418 400 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 EPAS1Q99814 870 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 OXCT2Q9BYC2 517 aaPredicted RBP8.35□□□□□ -1.07
CD44-205ENST00000352818 FAM117AQ9C073 453 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 NRSN2Q9GZP1 204 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 NSRP1Q9H0G5 558 aaKnown RBP8.35□□□□□ -1.07
CD44-205ENST00000352818 OSBPL2Q9H1P3 480 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 ATXN3LQ9H3M9 355 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 ZNF768Q9H5H4 540 aaKnown RBP8.35□□□□□ -1.07
CD44-205ENST00000352818 TASP1Q9H6P5 420 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 ECT2Q9H8V3 914 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 ETNK1Q9HBU6 452 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 ZDHHC4Q9NPG8 344 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 CD93Q9NPY3 652 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 PPANQ9NQ55 473 aaKnown RBP8.35□□□□□ -1.07
CD44-205ENST00000352818 ABCC13Q9NSE7 274 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 THG1LQ9NWX6 298 aaKnown RBP8.35□□□□□ -1.07
CD44-205ENST00000352818 DDIT4Q9NX09 232 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 ARHGEF38Q9NXL2 777 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 CELSR1Q9NYQ6 3014 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 CACNA1DQ01668 2161 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 ZNF638Q14966 1978 aaKnown RBP8.35□□□□□ -1.07
CD44-205ENST00000352818 PCNX1Q96RV3 2341 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 OR6C75A6NL08 312 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 RASA4BC9J798 803 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 IRAK2O43187 625 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 RASA4O43374 803 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 BRAFP15056 766 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 ERCC2P18074 760 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 MX2P20592 715 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 PRKCHP24723 683 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 GABRR2P28476 465 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 OPRD1P41143 372 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 ELK3P41970 407 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 SEC24CP53992 1094 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 TPI1P60174 286 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 PPIDQ08752 370 aaKnown RBP8.34□□□□□ -1.07
CD44-205ENST00000352818 GALNT2Q10471 571 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 NME3Q13232 169 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 TMED2Q15363 201 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 SKIDA1Q1XH10 827 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 PARP6Q2NL67 630 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 ANKRD20A2Q5SQ80 823 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 ANKRD20A1Q5TYW2 823 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 ANKRD20A3Q5VUR7 823 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 BSPRYQ5W0U4 402 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 STEAP4Q687X5 459 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 CRYBG3Q68DQ2 2970 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 MSANTD2Q6P1R3 559 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 FOXR1Q6PIV2 292 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 C3orf62Q6ZUJ4 267 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 ZNF534Q76KX8 674 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 DNAJB7Q7Z6W7 309 aaPredicted RBP8.34□□□□□ -1.07
CD44-205ENST00000352818 SRLQ86TD4 932 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 TMEM150AQ86TG1 271 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 PALM2Q8IXS6 379 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 SRRM1Q8IYB3 904 aaKnown RBP8.34□□□□□ -1.07
CD44-205ENST00000352818 ARHGAP18Q8N392 663 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 TTC9BQ8N6N2 239 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 TXNDC5Q8NBS9 432 aaKnown RBP8.34□□□□□ -1.07
CD44-205ENST00000352818 CCDC110Q8TBZ0 833 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 FBF1Q8TES7 1133 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 MZB1Q8WU39 189 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 DCAKDQ8WVC6 231 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 CKAP2Q8WWK9 683 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 ALKBH8Q96BT7 664 aaKnown RBP8.34□□□□□ -1.07
CD44-205ENST00000352818 HDAC11Q96DB2 347 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 ZNF419Q96HQ0 510 aaPredicted RBP8.34□□□□□ -1.07
CD44-205ENST00000352818 HAPLN3Q96S86 360 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 PAFAH2Q99487 392 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 VAT1Q99536 393 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 GAREM1Q9H706 876 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 COMMD8Q9NX08 183 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 NKIRAS1Q9NYS0 192 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 IL37Q9NZH6 218 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 RSPH14Q9UHP6 348 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 ZNF180Q9UJW8 692 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 NEU3Q9UQ49 428 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 CHMP2BQ9UQN3 213 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 TTLL3Q9Y4R7 772 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 PCDHGB2Q9Y5G2 931 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 HEMK1Q9Y5R4 338 aaPredicted RBP8.34□□□□□ -1.07
CD44-205ENST00000352818 AKAP9Q99996 3911 aa8.34□□□□□ -1.07
CD44-205ENST00000352818 NUP210Q8TEM1 1887 aaPredicted RBP8.34□□□□□ -1.07
CD44-205ENST00000352818 IQANK1A0A1B0GTG1 560 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 TCRBV9S1A1TA0A576 114 aa8.33□□□□□ -1.08
CD44-205ENST00000352818 FAM92AA1XBS5 289 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms