RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 DLG1Q12959 904 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LAMB3Q13751 1172 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SLC14A2Q15849 920 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ZYG11AQ6WRX3 759 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GPR65Q8IYL9 337 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CARNMT1Q8N4J0 409 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 RDH11Q8TC12 318 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 STYXQ8WUJ0 223 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 DNAJC1Q96KC8 554 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 RILPQ96NA2 401 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GPR78Q96P69 363 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SUDS3Q9H7L9 328 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ARMCX1Q9P291 453 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 MARCH4Q9P2E8 410 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TRAFD1O14545 582 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SNAP91O60641 907 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CLCN5P51795 746 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CYP4F8P98187 520 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CREMQ03060 361 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LRRC8EQ6NSJ5 796 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LINGO4Q6UY18 593 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GAREM2Q75VX8 874 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 NECAB2Q7Z6G3 386 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GALNT7Q86SF2 657 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LMNTD2Q8IXW0 634 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 OR13C4Q8NGS5 318 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 PEX13Q92968 403 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 UTP4Q969X6 686 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 OLFM1Q99784 485 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TUBB6Q9BUF5 446 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GATA5Q9BWX5 397 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 UNKQ9C0B0 810 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SCUBE2Q9NQ36 999 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LNPEPQ9UIQ6 1025 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ASB3Q9Y575 518 aa14.19□□□□□ -0.14
CDK5RAP1-202ENST00000346416 A0A087X1B8 175 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TARM1B6A8C7 271 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 HNRNPCL1O60812 293 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 H2AFYO75367 372 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 HSPA4LO95757 839 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CD160O95971 181 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 S1PR4O95977 384 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LINC00271P0C7V0 271 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 MZF1P28698 734 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 KRT72Q14CN4 511 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 FAM91A1Q658Y4 838 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ZNF783Q6ZMS7 281 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 Q6ZNB5 142 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 FIBCD1Q8N539 461 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 HJURPQ8NCD3 748 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 BHMTQ93088 406 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 RMDN1Q96DB5 314 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TMA16Q96EY4 203 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 PTCD3Q96EY7 689 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 NSL1Q96IY1 281 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 RAB3IPQ96QF0 476 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TDRD1Q9BXT4 1180 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 IL23AQ9NPF7 189 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 XPR1Q9UBH6 696 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 STK39Q9UEW8 545 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ARIH1Q9Y4X5 557 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LAMA3Q16787 3333 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TYW5A2RUC4 315 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TMEM114B3SHH9 223 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GLP2RO95838 553 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GOT2P00505 430 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 PRLP01236 227 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CES1P23141 567 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 PTPN4P29074 926 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TSNAXIP1Q2TAA8 658 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LIPMQ5VYY2 423 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 MAVSQ7Z434 540 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 HS6ST3Q8IZP7 471 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 MAB21L3Q8N8X9 362 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 KLHL23Q8NBE8 558 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 HEXDCQ8WVB3 486 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 MOCOSQ96EN8 888 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 NUDCD1Q96RS6 583 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 FEM1AQ9BSK4 669 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TBC1D10AQ9BXI6 508 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 STN1Q9H668 368 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SSX2IPQ9Y2D8 614 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 PCDHGC4Q9Y5F7 938 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SPO11Q9Y5K1 396 aa14.18□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CCDC162PA2VCL2 907 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GFRA2O00451 464 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CCDC22O60826 627 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 RPP40O75818 363 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ZMPSTE24O75844 475 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TMCC1O94876 653 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LUC7L3O95232 432 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CXCL14O95715 111 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LRG1P02750 347 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CKMP06732 381 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 PDHA1P08559 390 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GRIA4P48058 902 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ALDH18A1P54886 795 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CSHL1Q14406 222 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms