RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 HSFY1Q96LI6 401 aa17.9■□□□□ 0.46
VHL-202ENST00000345392 MRPL57Q9BQC6 102 aaKnown RBP17.9■□□□□ 0.46
VHL-202ENST00000345392 SLC25A23Q9BV35 468 aa17.9■□□□□ 0.46
VHL-202ENST00000345392 KIFC1Q9BW19 673 aa17.9■□□□□ 0.46
VHL-202ENST00000345392 FAM124BQ9H5Z6 455 aaPredicted RBP17.9■□□□□ 0.46
VHL-202ENST00000345392 TUT1Q9H6E5 874 aaKnown RBP17.9■□□□□ 0.46
VHL-202ENST00000345392 TUBA8Q9NY65 449 aaPredicted RBP17.9■□□□□ 0.46
VHL-202ENST00000345392 ERI2A8K979 691 aaKnown RBP17.89■□□□□ 0.45
VHL-202ENST00000345392 J3QRK9 145 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 CBFA2T3O75081 653 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 HSPA8P11142 646 aaKnown RBP17.89■□□□□ 0.45
VHL-202ENST00000345392 ATP5F1P24539 256 aaPredicted RBP17.89■□□□□ 0.45
VHL-202ENST00000345392 SLC1A2P43004 574 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 RPL34P49207 117 aaKnown RBP17.89■□□□□ 0.45
VHL-202ENST00000345392 C21orf59P57076 290 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 RELAQ04206 551 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 ATP1A4Q13733 1029 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 CTU1Q7Z7A3 348 aaKnown RBP17.89■□□□□ 0.45
VHL-202ENST00000345392 FUNDC1Q8IVP5 155 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 FBXL8Q96CD0 374 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 ARMC1Q9NVT9 282 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 OAZ3Q9UMX2 235 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 MRPL42Q9Y6G3 142 aaKnown RBP17.89■□□□□ 0.45
VHL-202ENST00000345392 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.89■□□□□ 0.45
VHL-202ENST00000345392 TRIM64CA6NLI5 447 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 SPTLC1O15269 473 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 CYP2C9P11712 490 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 NEDD8Q15843 81 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 ARMCX2Q7L311 632 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 WNT8BQ93098 351 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 SNX25Q9H3E2 840 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 CCM2LQ9NUG4 571 aaPredicted RBP17.89■□□□□ 0.45
VHL-202ENST00000345392 NSMCE4AQ9NXX6 385 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 CDH7Q9ULB5 785 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 COQ6Q9Y2Z9 468 aa17.89■□□□□ 0.45
VHL-202ENST00000345392 NME4O00746 187 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 DAB1O75553 588 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 OCM2P0CE71 109 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 OCMP0CE72 109 aaPredicted RBP17.88■□□□□ 0.45
VHL-202ENST00000345392 ARNTP27540 789 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 OXTRP30559 389 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 ADCYAP1R1P41586 468 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 PPIL2Q13356 520 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 CAPRIN1Q14444 709 aaKnown RBP17.88■□□□□ 0.45
VHL-202ENST00000345392 ZNF829Q3KNS6 432 aaPredicted RBP17.88■□□□□ 0.45
VHL-202ENST00000345392 RBM20Q5T481 1227 aaKnown RBP17.88■□□□□ 0.45
VHL-202ENST00000345392 FAM45BPQ6NSW5 357 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 C16orf87Q6PH81 154 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 DCDC5Q6ZRR9 648 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 PDZD4Q76G19 769 aaPredicted RBP17.88■□□□□ 0.45
VHL-202ENST00000345392 CMTR2Q8IYT2 770 aaKnown RBP17.88■□□□□ 0.45
VHL-202ENST00000345392 FAM45AQ8TCE6 357 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 BORCS5Q969J3 196 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 NT5C3BQ969T7 300 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 VPS50Q96JG6 964 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 GIMAP2Q9UG22 337 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 SCN4AP35499 1836 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 DHRS12A0PJE2 317 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 FUOMA2VDF0 154 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 A8MT66 165 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 FAM83EQ2M2I3 478 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 SLC36A3Q495N2 470 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 NAPEPLDQ6IQ20 393 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 C8orf82Q6P1X6 216 aaPredicted RBP17.88■□□□□ 0.45
VHL-202ENST00000345392 FAM35AQ86V20 835 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 CRYBG2Q8N1P7 616 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 MFSD2AQ8NA29 543 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 TNIP2Q8NFZ5 429 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 ADAMTS16Q8TE57 1224 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 TANKQ92844 425 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 TEKT5Q96M29 485 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 C3orf30Q96M34 536 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 NXF3Q9H4D5 531 aaKnown RBP17.88■□□□□ 0.45
VHL-202ENST00000345392 PTBP2Q9UKA9 531 aaKnown RBP17.88■□□□□ 0.45
VHL-202ENST00000345392 STAP1Q9ULZ2 295 aa17.88■□□□□ 0.45
VHL-202ENST00000345392 DNAJC25-GNG10A0A024R161 153 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 K7EPI3 171 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 CLOCKO15516 846 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 FUCA1P04066 466 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 ZNF182P17025 639 aaPredicted RBP17.87■□□□□ 0.45
VHL-202ENST00000345392 GRM5P41594 1212 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 SLC12A2P55011 1212 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 PLCL1Q15111 1095 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 ZNF789Q5FWF6 425 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 C9orf57Q5W0N0 161 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 ZNF470Q6ECI4 717 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 PKN3Q6P5Z2 889 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 CYHR1Q6ZMK1 362 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 KCTD8Q6ZWB6 473 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 DDHD1Q8NEL9 900 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 IPMKQ8NFU5 416 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 SLC45A3Q96JT2 553 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 ATXN3LQ9H3M9 355 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 IGSF5Q9NSI5 407 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 A0A0G2JLL6 359 aaPredicted RBP17.87■□□□□ 0.45
VHL-202ENST00000345392 ZNF701M0R085 212 aaPredicted RBP17.87■□□□□ 0.45
VHL-202ENST00000345392 NR5A2O00482 541 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 UBFD1O14562 309 aaKnown RBP17.87■□□□□ 0.45
VHL-202ENST00000345392 CHRM3P20309 590 aa17.87■□□□□ 0.45
VHL-202ENST00000345392 SLC26A2P50443 739 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms