RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 BZW1Q7L1Q6 419 aaKnown RBP13.95□□□□□ -0.18
TPM4-202ENST00000344824 ERMP1Q7Z2K6 904 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 PRUNE1Q86TP1 453 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 CDKL3Q8IVW4 592 aaPredicted RBP13.95□□□□□ -0.18
TPM4-202ENST00000344824 ATPAF2Q8N5M1 289 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 LZTR1Q8N653 840 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 PAF1Q8N7H5 531 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 TFB1MQ8WVM0 346 aaKnown RBP13.95□□□□□ -0.18
TPM4-202ENST00000344824 KLK6Q92876 244 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 OLFM3Q96PB7 478 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 QKIQ96PU8 341 aaKnown RBP eCLIP13.95□□□□□ -0.18
TPM4-202ENST00000344824 TRIM51Q9BSJ1 452 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 MED19A0JLT2 244 aaPredicted RBP13.94□□□□□ -0.18
TPM4-202ENST00000344824 EFCAB8A8MWE9 144 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 KCNN4O15554 427 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 RNGTTO60942 597 aaKnown RBP13.94□□□□□ -0.18
TPM4-202ENST00000344824 ECEL1O95672 775 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 CER1O95813 267 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 IFNB1P01574 187 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 MX2P20592 715 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 GARSP41250 739 aaKnown RBP13.94□□□□□ -0.18
TPM4-202ENST00000344824 GRIA4P48058 902 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 VPS41P49754 854 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 GDF10P55107 478 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 RAD51Q06609 339 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 GALNT2Q10471 571 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 PPP1R7Q15435 360 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 OASLQ15646 514 aaKnown RBP13.94□□□□□ -0.18
TPM4-202ENST00000344824 SLC45A4Q5BKX6 768 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 LRRC73Q5JTD7 316 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 CCDC70Q6NSX1 233 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 PSAPL1Q6NUJ1 521 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 PARS2Q7L3T8 475 aaKnown RBP13.94□□□□□ -0.18
TPM4-202ENST00000344824 PRPF39Q86UA1 669 aaKnown RBP13.94□□□□□ -0.18
TPM4-202ENST00000344824 FAM71DQ8N9W8 422 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 DEFB124Q8NES8 71 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 ATL2Q8NHH9 583 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 GRK7Q8WTQ7 553 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 CASKIN2Q8WXE0 1202 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 ISG20Q96AZ6 181 aaKnown RBP13.94□□□□□ -0.18
TPM4-202ENST00000344824 SERAC1Q96JX3 654 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 KLHL32Q96NJ5 620 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 RUNDC3BQ96NL0 473 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 CINPQ9BW66 212 aaPredicted RBP13.94□□□□□ -0.18
TPM4-202ENST00000344824 GAREM1Q9H706 876 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 EBF2Q9HAK2 575 aa13.94□□□□□ -0.18
TPM4-202ENST00000344824 HACD1B0YJ81 288 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 NEMP1O14524 444 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 PRAMEF11O60813 436 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 PIGNO95427 931 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 ITGAVP06756 1048 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 ZSCAN5DPP0CG00 497 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 ADRB3P13945 408 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 ETS1P14921 441 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 ITGB7P26010 798 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 PTGIRP43119 386 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 CCR5P51681 352 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 TERF1P54274 439 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 XRCC4Q13426 336 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 NAA30Q147X3 362 aaPredicted RBP13.93□□□□□ -0.18
TPM4-202ENST00000344824 AFMIDQ63HM1 303 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 DRICH1Q6PGQ1 229 aaPredicted RBP13.93□□□□□ -0.18
TPM4-202ENST00000344824 JAMLQ86YT9 394 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 TAB3Q8N5C8 712 aaPredicted RBP13.93□□□□□ -0.18
TPM4-202ENST00000344824 UBXN4Q92575 508 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 CEP41Q9BYV8 373 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 TRIM31Q9BZY9 425 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 ZDHHC5Q9C0B5 715 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 KDM4CQ9H3R0 1056 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 IL21RQ9HBE5 538 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 PREBQ9HCU5 417 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 PCYOX1Q9UHG3 505 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 DRG1Q9Y295 367 aaKnown RBP13.93□□□□□ -0.18
TPM4-202ENST00000344824 CA5BQ9Y2D0 317 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 ANKRD6Q9Y2G4 727 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 SNX11Q9Y5W9 270 aa13.93□□□□□ -0.18
TPM4-202ENST00000344824 CXorf51AA0A1B0GTR3 108 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 A0A1W2PQU0 124 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 SLC31A1O15431 190 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 HEXIM1O94992 359 aaKnown RBP13.92□□□□□ -0.18
TPM4-202ENST00000344824 POP4O95707 220 aaKnown RBP13.92□□□□□ -0.18
TPM4-202ENST00000344824 GAS8O95995 478 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 XPAP23025 273 aaPredicted RBP13.92□□□□□ -0.18
TPM4-202ENST00000344824 TAS2R38P59533 333 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 RACK1P63244 317 aaKnown RBP13.92□□□□□ -0.18
TPM4-202ENST00000344824 BNC1Q01954 994 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 DHX34Q14147 1143 aaKnown RBP13.92□□□□□ -0.18
TPM4-202ENST00000344824 PRKD1Q15139 912 aaPredicted RBP13.92□□□□□ -0.18
TPM4-202ENST00000344824 ERCC6LQ2NKX8 1250 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 KIF19Q2TAC6 998 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 HLA-BQ31612 363 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 MYLK3Q32MK0 819 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 SETMARQ53H47 684 aaPredicted RBP13.92□□□□□ -0.18
TPM4-202ENST00000344824 INO80DQ53TQ3 878 aaPredicted RBP13.92□□□□□ -0.18
TPM4-202ENST00000344824 CFAP58Q5T655 872 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 NAPEPLDQ6IQ20 393 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 MAATS1Q7Z4T9 603 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 TRIM69Q86WT6 500 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 CCDC13Q8IYE1 715 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 CCDC89Q8N998 374 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms