RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 IRGCQ6NXR0 463 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 CNSTQ6PJW8 725 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 PRSS55Q6UWB4 352 aaPredicted RBP13.14□□□□□ -0.31
TCF3-202ENST00000344749 CCDC81Q6ZN84 652 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 MARK2Q7KZI7 788 aaKnown RBP13.14□□□□□ -0.31
TCF3-202ENST00000344749 MED8Q96G25 268 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 DNAJC1Q96KC8 554 aaKnown RBP13.14□□□□□ -0.31
TCF3-202ENST00000344749 NSMCE2Q96MF7 247 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 CDK5RAP1Q96SZ6 601 aaKnown RBP13.14□□□□□ -0.31
TCF3-202ENST00000344749 PAAF1Q9BRP4 392 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 TMEM106CQ9BVX2 250 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 CYLDQ9NQC7 956 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 TRAF6Q9Y4K3 522 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 MYO7AQ13402 2215 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 MYH4Q9Y623 1939 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 TGDSO95455 350 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 FASP25445 335 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 SLC10A2Q12908 348 aaPredicted RBP13.14□□□□□ -0.31
TCF3-202ENST00000344749 SAMD4BQ5PRF9 694 aaKnown RBP13.14□□□□□ -0.31
TCF3-202ENST00000344749 YAF2Q8IY57 180 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 CD99L2Q8TCZ2 262 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 USP29Q9HBJ7 922 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 SSU72Q9NP77 194 aaKnown RBP13.14□□□□□ -0.31
TCF3-202ENST00000344749 IGSF9Q9P2J2 1179 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 SLC25A13Q9UJS0 675 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 ADAMTS7Q9UKP4 1686 aa13.14□□□□□ -0.31
TCF3-202ENST00000344749 LRP5O75197 1615 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 GNG14A0A1W2PPG7 69 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 KPNA3O00505 521 aaPredicted RBP13.13□□□□□ -0.31
TCF3-202ENST00000344749 MATN3O15232 486 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 IRAK2O43187 625 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 TBC1D4O60343 1298 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 AMHP03971 560 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 CCNCP24863 283 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 CLDN10P78369 228 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 OCA2Q04671 838 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 ARHGAP15Q53QZ3 475 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 FAM151BQ6UXP7 276 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 C2orf49Q9BVC5 232 aaPredicted RBP13.13□□□□□ -0.31
TCF3-202ENST00000344749 ARL15Q9NXU5 204 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 POLG2Q9UHN1 485 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 TCAF1Q9Y4C2 921 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 RAD54BQ9Y620 910 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 N4BP2Q86UW6 1770 aaPredicted RBP13.13□□□□□ -0.31
TCF3-202ENST00000344749 PLCH1Q4KWH8 1693 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 KANSL1LA0AUZ9 987 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 TMEM114B3SHH9 223 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 C1RP00736 705 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 MC4RP32245 332 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 PSEN1P49768 467 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 SLC7A2P52569 658 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 DYNC1I2Q13409 638 aaKnown RBP13.13□□□□□ -0.31
TCF3-202ENST00000344749 IKBKEQ14164 716 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 INSCQ1MX18 579 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 ACSBG2Q5FVE4 666 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 SWT1Q5T5J6 900 aaKnown RBP13.13□□□□□ -0.31
TCF3-202ENST00000344749 LRRC49Q8IUZ0 686 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 EPB41L4BQ9H329 900 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 ZDHHC6Q9H6R6 413 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 PCDHB12Q9Y5F1 795 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.13□□□□□ -0.31
TCF3-202ENST00000344749 TM7SF2O76062 418 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 PRKCGP05129 697 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 CKBP12277 381 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 LPOP22079 712 aaPredicted RBP13.13□□□□□ -0.31
TCF3-202ENST00000344749 HOXA11P31270 313 aaPredicted RBP13.13□□□□□ -0.31
TCF3-202ENST00000344749 GPR15P49685 360 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 MAPK10P53779 464 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 SEMG2Q02383 582 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 DEFB115Q30KQ5 88 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 USP41Q3LFD5 358 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 STK32CQ86UX6 486 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 SPPL2BQ8TCT7 592 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 MOCOSQ96EN8 888 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 NPY6RQ99463 290 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 CORO1BQ9BR76 489 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 PAPOLBQ9NRJ5 636 aaKnown RBP13.13□□□□□ -0.31
TCF3-202ENST00000344749 GTF2IRD1Q9UHL9 959 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 C10orf71Q711Q0 1435 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 ATP6V1C1P21283 382 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 GSSP48637 474 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 SLC10A7Q0GE19 358 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 ZBTB17Q13105 803 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 VPS37AQ8NEZ2 397 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 HEXDCQ8WVB3 486 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 FAM120BQ96EK7 910 aaKnown RBP13.13□□□□□ -0.31
TCF3-202ENST00000344749 VPS45Q9NRW7 570 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 DDX18Q9NVP1 670 aaKnown RBP13.13□□□□□ -0.31
TCF3-202ENST00000344749 LIMD1Q9UGP4 676 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 FAM32AQ9Y421 112 aaKnown RBP13.13□□□□□ -0.31
TCF3-202ENST00000344749 AP4S1Q9Y587 144 aa13.13□□□□□ -0.31
TCF3-202ENST00000344749 SLX4Q8IY92 1834 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 MGEA5O60502 916 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 FGF1P05230 155 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 ABCB1P08183 1280 aaPredicted RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 RHOQP17081 205 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 RPS24P62847 133 aaKnown RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 PURAQ00577 322 aaKnown RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 DMC1Q14565 340 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms