RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 TRIM38O00635 465 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 TRAFD1O14545 582 aaPredicted RBP20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 HTRA2O43464 458 aaPredicted RBP20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 SDC3O75056 442 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 GP1BAP07359 652 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 CR2P20023 1033 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 CES1P23141 567 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 ARHGAP25P42331 645 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 RGRP47804 291 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 SCNN1BP51168 640 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 SLC10A7Q0GE19 358 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 MARC1Q5VT66 337 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 TXNRD3NBQ6F5E7 133 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 DHRS13Q6UX07 377 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 MACC1Q6ZN28 852 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 ARHGAP36Q6ZRI8 547 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 NETO2Q8NC67 525 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 BTBD6Q96KE9 485 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 CCDC42Q96M95 316 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 MGME1Q9BQP7 344 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 CCDC86Q9H6F5 360 aaKnown RBP20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 ETNK2Q9NVF9 386 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 SPASTQ9UBP0 616 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 SALL4Q9UJQ4 1053 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 INTUQ9ULD6 942 aa20.18■□□□□ 0.82
CEACAM3-201ENST00000344550 SPEGQ15772 3267 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 MFAP3LO75121 409 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 GIMD1P0DJR0 217 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 C6P13671 934 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 HTR1BP28222 390 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 IGFALSP35858 605 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 DNAJC3Q13217 504 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 CAMK2BQ13554 666 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 PAFAH1B3Q15102 231 aaKnown RBP20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 TIGD7Q6NT04 549 aaPredicted RBP20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 ZCCHC8Q6NZY4 707 aaKnown RBP20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 SARM1Q6SZW1 724 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 PROSER1Q86XN7 944 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 RHOT2Q8IXI1 618 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 TEX26Q8N6G2 289 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 KCTD6Q8NC69 237 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 ZNF548Q8NEK5 533 aaPredicted RBP20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 TSGA13Q96PP4 275 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 ANP32EQ9BTT0 268 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 WRAP53Q9BUR4 548 aaKnown RBP20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 UCKL1Q9NWZ5 548 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 ASPMQ8IZT6 3477 aa20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 GOLGA4Q13439 2230 aaKnown RBP20.17■□□□□ 0.82
CEACAM3-201ENST00000344550 PLXNB3Q9ULL4 1909 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 AQP9O43315 295 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 MTA2O94776 668 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 HOXC4P09017 264 aaPredicted RBP20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 JUPP14923 745 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 JUNDP17535 347 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 MX2P20592 715 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 SSR1P43307 286 aaKnown RBP20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 LIG3P49916 1009 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 DAB2P98082 770 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 GALNT2Q10471 571 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 MTM1Q13496 603 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 DPYSL3Q14195 570 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 TCEAL1Q15170 157 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 WSCD2Q2TBF2 565 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 DPPA4Q7L190 304 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 FAF2Q96CS3 445 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 SLC13A1Q9BZW2 595 aa20.16■□□□□ 0.82
CEACAM3-201ENST00000344550 K7ESM1 405 aa20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 MUSKO15146 869 aa20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 LZTS3O60299 673 aaPredicted RBP20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 KRT10P13645 584 aa20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 ITIH2P19823 946 aa20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 GARSP41250 739 aaKnown RBP20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 MMP13P45452 471 aa20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 EIF2B5Q13144 721 aaKnown RBP20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 LRRC73Q5JTD7 316 aa20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 LVRNQ6Q4G3 990 aa20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 ZSWIM9Q86XI8 627 aa20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 TP53INP2Q8IXH6 220 aa20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 FSTL5Q8N475 847 aaPredicted RBP20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 PAF1Q8N7H5 531 aa20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 GLMNQ92990 594 aa20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 NHEJ1Q9H9Q4 299 aaPredicted RBP20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 SCUBE2Q9NQ36 999 aa20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 MBNL1Q9NR56 388 aaKnown RBP20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 PHTF1Q9UMS5 762 aa20.15■□□□□ 0.82
CEACAM3-201ENST00000344550 ANKRD11Q6UB99 2663 aaPredicted RBP20.14■□□□□ 0.82
CEACAM3-201ENST00000344550 SRRM3A6NNA2 597 aaPredicted RBP20.14■□□□□ 0.81
CEACAM3-201ENST00000344550 LMO7DNF2Z398 122 aa20.14■□□□□ 0.81
CEACAM3-201ENST00000344550 ELFN1P0C7U0 828 aa20.14■□□□□ 0.81
CEACAM3-201ENST00000344550 CCNCP24863 283 aa20.14■□□□□ 0.81
CEACAM3-201ENST00000344550 PPARDQ03181 441 aa20.14■□□□□ 0.81
CEACAM3-201ENST00000344550 IRF4Q15306 451 aa20.14■□□□□ 0.81
CEACAM3-201ENST00000344550 IFI16Q16666 785 aaKnown RBP20.14■□□□□ 0.81
CEACAM3-201ENST00000344550 CCDC157Q569K6 752 aa20.14■□□□□ 0.81
CEACAM3-201ENST00000344550 ANKRD20A8PQ5CZ79 823 aa20.14■□□□□ 0.81
CEACAM3-201ENST00000344550 LRRC38Q5VT99 294 aa20.14■□□□□ 0.81
CEACAM3-201ENST00000344550 ALG1LQ6GMV1 187 aa20.14■□□□□ 0.81
CEACAM3-201ENST00000344550 LIPIQ6XZB0 460 aa20.14■□□□□ 0.81
CEACAM3-201ENST00000344550 NDUFAF2Q8N183 169 aa20.14■□□□□ 0.81
CEACAM3-201ENST00000344550 PCDH19Q8TAB3 1148 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms