RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.66□□□□□ -0.226e-11■■□□□ 13.5
CDC42-202ENST00000344548 PHTF1Q9UMS5 762 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 NEDD8-MDP1E9PL57 170 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 SIN3BO75182 1162 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 FGF1P05230 155 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 C2P06681 752 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 HNRNPA1P09651 372 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDC42-202ENST00000344548 ALADP13716 330 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 IFT88Q13099 833 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 FUT11Q495W5 492 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 INO80DQ53TQ3 878 aaPredicted RBP13.66□□□□□ -0.22
CDC42-202ENST00000344548 DGKKQ5KSL6 1271 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 MPP7Q5T2T1 576 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 RBM20Q5T481 1227 aaKnown RBP13.66□□□□□ -0.22
CDC42-202ENST00000344548 N4BP2L1Q5TBK1 243 aaPredicted RBP13.66□□□□□ -0.22
CDC42-202ENST00000344548 SLC41A1Q8IVJ1 513 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 ADGRG2Q8IZP9 1017 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 SPATA6LQ8N4H0 392 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 C2CD4AQ8NCU7 369 aaPredicted RBP13.66□□□□□ -0.22
CDC42-202ENST00000344548 LRRC8CQ8TDW0 803 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 RMDN1Q96DB5 314 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 NDNQ99608 321 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 GPR22Q99680 433 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 C20orf27Q9GZN8 174 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 RHOJQ9H4E5 214 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 MANSC1Q9H8J5 431 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 FBXO5Q9UKT4 447 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 ZNF510Q9Y2H8 683 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 A0A096LPK6 155 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 EDF1O60869 148 aaKnown RBP13.65□□□□□ -0.22
CDC42-202ENST00000344548 SLC4A1P02730 911 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 CSE1LP55060 971 aaKnown RBP13.65□□□□□ -0.22
CDC42-202ENST00000344548 OVGP1Q12889 678 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 LY6G5CQ5SRR4 150 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 ZCCHC23Q6ZST2 131 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 CAMK1DQ8IU85 385 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 CACNA2D3Q8IZS8 1091 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 OR6P1Q8NGX9 317 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 UNKQ9C0B0 810 aaKnown RBP13.65□□□□□ -0.22
CDC42-202ENST00000344548 EVLQ9UI08 416 aaPredicted RBP13.65□□□□□ -0.22
CDC42-202ENST00000344548 C2orf16Q68DN1 1984 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 XYLBO75191 536 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 PAPSS2O95340 614 aaPredicted RBP13.65□□□□□ -0.22
CDC42-202ENST00000344548 PIGNO95427 931 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 PENKP01210 267 aaPredicted RBP13.65□□□□□ -0.22
CDC42-202ENST00000344548 VIPR2P41587 438 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 THOC5Q13769 683 aaKnown RBP13.65□□□□□ -0.22
CDC42-202ENST00000344548 TMEM215Q68D42 235 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 TRIM68Q6AZZ1 485 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 TNS4Q8IZW8 715 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 NAT16Q8N8M0 369 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 BRSK1Q8TDC3 778 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 ACMSDQ8TDX5 336 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 EID2BQ96D98 161 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 BBS2Q9BXC9 721 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 IQCGQ9H095 443 aaKnown RBP13.65□□□□□ -0.22
CDC42-202ENST00000344548 TLE6Q9H808 572 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 ZDHHC7Q9NXF8 308 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 KIAA1522Q9P206 1035 aaPredicted RBP13.65□□□□□ -0.22
CDC42-202ENST00000344548 MRPS23Q9Y3D9 190 aaKnown RBP13.65□□□□□ -0.22
CDC42-202ENST00000344548 PCDHB9Q9Y5E1 797 aa13.65□□□□□ -0.22
CDC42-202ENST00000344548 CCDC162PA2VCL2 907 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 ANKRD66B4E2M5 251 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 FZD6O60353 706 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 PLIN3O60664 434 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 GOT2P00505 430 aaKnown RBP13.64□□□□□ -0.23
CDC42-202ENST00000344548 PFKLP17858 780 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 KCNA4P22459 653 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 ABL2P42684 1182 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 ACVR1Q04771 509 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 NSUN2Q08J23 767 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDC42-202ENST00000344548 MESP2Q0VG99 397 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 KCNC3Q14003 757 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 ARHGAP15Q53QZ3 475 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 PITRM1Q5JRX3 1037 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 CLEC14AQ86T13 490 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 CCDC63Q8NA47 563 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 SMG7Q92540 1137 aaKnown RBP13.64□□□□□ -0.23
CDC42-202ENST00000344548 IRF7Q92985 503 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 MOCOSQ96EN8 888 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 C2orf49Q9BVC5 232 aaPredicted RBP13.64□□□□□ -0.23
CDC42-202ENST00000344548 SLCO3A1Q9UIG8 710 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 TIMM44O43615 452 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 PROCP04070 461 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 ALPIP09923 528 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 SLC35E2BP0CK96 405 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 TYRP14679 529 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 PAMP19021 973 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 CDKN1CP49918 316 aaPredicted RBP13.64□□□□□ -0.23
CDC42-202ENST00000344548 TAS2R39P59534 338 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 USP10Q14694 798 aaKnown RBP13.64□□□□□ -0.23
CDC42-202ENST00000344548 TCEAL5Q5H9L2 206 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 RTL10Q7L3V2 364 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 ZSWIM9Q86XI8 627 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 CILP2Q8IUL8 1156 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 CCDC197Q8NCU1 140 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 OR4K2Q8NGD2 314 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 ASIC4Q96FT7 647 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 CABS1Q96KC9 395 aa13.64□□□□□ -0.23
CDC42-202ENST00000344548 RMDN2Q96LZ7 410 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms