RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 CNSTQ6PJW8 725 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 DCAF4L2Q8NA75 395 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 PPP1R14CQ8TAE6 165 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 SH3RF2Q8TEC5 729 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 RMDN1Q96DB5 314 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 TBATAQ96M53 351 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 C7orf26Q96N11 449 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 MTIF3Q9H2K0 278 aaKnown RBP20.11■□□□□ 0.81
RTN1-202ENST00000342503 ZNF395Q9H8N7 513 aaPredicted RBP20.11■□□□□ 0.81
RTN1-202ENST00000342503 DCTN4Q9UJW0 460 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 CCL26Q9Y258 94 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 FCF1Q9Y324 198 aaKnown RBP20.11■□□□□ 0.81
RTN1-202ENST00000342503 PCDHGC4Q9Y5F7 938 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 OR51F1A6NGY5 319 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 C5orf67F2Z3F1 127 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 CLASP2O75122 1294 aaKnown RBP20.1■□□□□ 0.81
RTN1-202ENST00000342503 SNNO75324 88 aaPredicted RBP20.1■□□□□ 0.81
RTN1-202ENST00000342503 FGF19O95750 216 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 PDHA1P08559 390 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 SCTRP47872 440 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 LEPRP48357 1165 aaKnown RBP20.1■□□□□ 0.81
RTN1-202ENST00000342503 RHOAP61586 193 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 OCRLQ01968 901 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 ACTN3Q08043 901 aaPredicted RBP20.1■□□□□ 0.81
RTN1-202ENST00000342503 NSUN2Q08J23 767 aaKnown RBP eCLIP20.1■□□□□ 0.81
RTN1-202ENST00000342503 TAF1BQ53T94 588 aaPredicted RBP20.1■□□□□ 0.81
RTN1-202ENST00000342503 MPP7Q5T2T1 576 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 C10orf107Q8IVU9 208 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 CEP97Q8IW35 865 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 GPATCH11Q8N954 259 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 ZNF398Q8TD17 642 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 GBF1Q92538 1859 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 PEX13Q92968 403 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 C1QTNF1Q9BXJ1 281 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 COPG2Q9UBF2 871 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 BPTFQ12830 3046 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 HGSO14964 777 aaPredicted RBP20.1■□□□□ 0.81
RTN1-202ENST00000342503 MT-CO1P00395 513 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 SLC35E2BP0CK96 405 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 DDX6P26196 483 aaKnown RBP eCLIP20.1■□□□□ 0.81
RTN1-202ENST00000342503 RAB10P61026 200 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 LMAN2Q12907 356 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 TRAF2Q12933 501 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 SLC12A1Q13621 1099 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 GALNTL6Q49A17 601 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 RTL10Q7L3V2 364 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 CILP2Q8IUL8 1156 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 CMTM8Q8IZV2 173 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 PNPLA1Q8N8W4 532 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 LPCAT1Q8NF37 534 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 OR13C4Q8NGS5 318 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 STYXQ8WUJ0 223 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 C20orf27Q9GZN8 174 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 SUDS3Q9H7L9 328 aaPredicted RBP20.1■□□□□ 0.81
RTN1-202ENST00000342503 RIMKLBQ9ULI2 386 aa20.1■□□□□ 0.81
RTN1-202ENST00000342503 RPP40O75818 363 aaKnown RBP20.09■□□□□ 0.81
RTN1-202ENST00000342503 FSBPO95073 299 aa20.09■□□□□ 0.81
RTN1-202ENST00000342503 GOT2P00505 430 aaKnown RBP20.09■□□□□ 0.81
RTN1-202ENST00000342503 RHOP08100 348 aa20.09■□□□□ 0.81
RTN1-202ENST00000342503 CPA3P15088 417 aa20.09■□□□□ 0.81
RTN1-202ENST00000342503 STMN1P16949 149 aa20.09■□□□□ 0.81
RTN1-202ENST00000342503 TAS2R39P59534 338 aa20.09■□□□□ 0.81
RTN1-202ENST00000342503 CCDC15Q0P6D6 951 aa20.09■□□□□ 0.81
RTN1-202ENST00000342503 ZNF460Q14592 562 aa20.09■□□□□ 0.81
RTN1-202ENST00000342503 RBM20Q5T481 1227 aaKnown RBP20.09■□□□□ 0.81
RTN1-202ENST00000342503 GALNT7Q86SF2 657 aa20.09■□□□□ 0.81
RTN1-202ENST00000342503 LDB1Q86U70 411 aaPredicted RBP20.09■□□□□ 0.81
RTN1-202ENST00000342503 LMNTD2Q8IXW0 634 aa20.09■□□□□ 0.81
RTN1-202ENST00000342503 TNS4Q8IZW8 715 aa20.09■□□□□ 0.81
RTN1-202ENST00000342503 SMIM14Q96QK8 99 aa20.09■□□□□ 0.81
RTN1-202ENST00000342503 C2orf49Q9BVC5 232 aaPredicted RBP20.09■□□□□ 0.81
RTN1-202ENST00000342503 NMRAL1Q9HBL8 299 aa20.09■□□□□ 0.81
RTN1-202ENST00000342503 KIAA1522Q9P206 1035 aaPredicted RBP20.09■□□□□ 0.81
RTN1-202ENST00000342503 MARCH4Q9P2E8 410 aaPredicted RBP20.09■□□□□ 0.81
RTN1-202ENST00000342503 CCDC162PA2VCL2 907 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 K7ERQ8 282 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 CRTAMO95727 393 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 CRABP2P29373 138 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 CD70P32970 193 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 CLCN5P51795 746 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 POU4F1Q01851 419 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 SLC5A9Q2M3M2 681 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 ARHGAP15Q53QZ3 475 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 ATXN7L2Q5T6C5 722 aaPredicted RBP20.08■□□□□ 0.81
RTN1-202ENST00000342503 MDGA1Q8NFP4 955 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 FIBINQ8TAL6 211 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 RIN3Q8TB24 985 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 KCTD4Q8WVF5 259 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 TSNARE1Q96NA8 513 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 OMDQ99983 421 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 TASP1Q9H6P5 420 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 KCNK13Q9HB14 408 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 THAP1Q9NVV9 213 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 SLC12A4Q9UP95 1085 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 RUVBL2Q9Y230 463 aaKnown RBP20.08■□□□□ 0.81
RTN1-202ENST00000342503 ACOT9Q9Y305 439 aa20.08■□□□□ 0.81
RTN1-202ENST00000342503 A0A0G2JND7 137 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 GRXCR1A8MXD5 290 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 G3V2L1 256 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 DCTN3O75935 186 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms