RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 CFAP57Q96MR6 1250 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 QKIQ96PU8 341 aaKnown RBP eCLIP3.56□□□□□ -1.84
CCDC66-202ENST00000341455 CSPG4P5Q96PW8 444 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 PNKPQ96T60 521 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 IL12RB2Q99665 862 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 WDCPQ9H6R7 721 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 CATSPERBQ9H7T0 1116 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 FAM204AQ9H8W3 233 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 RASAL2Q9UJF2 1139 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 MMP17Q9ULZ9 603 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 DMTF1Q9Y222 760 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 PPP2R2CQ9Y2T4 447 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 PRUNE2Q8WUY3 3088 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 SHROOM3Q8TF72 1996 aa3.56□□□□□ -1.84
CCDC66-202ENST00000341455 MYLKQ15746 1914 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 TRAV20A0A0B4J274 112 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 SLC12A8A0AV02 714 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 OTOL1A6NHN0 477 aaPredicted RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 ENO4A6NNW6 628 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 H3BRJ5 948 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 M0QYT0 321 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 KRT86O43790 486 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 BUB1BO60566 1050 aaPredicted RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 WISP1O95388 367 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 C1QTNF9P0C862 333 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 ABCB4P21439 1286 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 KDELR1P24390 212 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 CCNCP24863 283 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 MAGEA1P43355 309 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 TAS2R40P59535 323 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 RPL26P61254 145 aaKnown RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 RPL6Q02878 288 aaKnown RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 PPIDQ08752 370 aaKnown RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 ILKQ13418 452 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 SPA17Q15506 151 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 HADHQ16836 314 aaKnown RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 FUT11Q495W5 492 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 SAMD5Q5TGI4 173 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 DCAF12L1Q5VU92 463 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 TAF3Q5VWG9 929 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 GRAMD4Q6IC98 578 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 LVRNQ6Q4G3 990 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 RINLQ6ZS11 566 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 CCAR2Q8N163 923 aaKnown RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 TAB3Q8N5C8 712 aaPredicted RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 PLD5Q8N7P1 536 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 OR13H1Q8NG92 308 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 USP7Q93009 1102 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 IGSF8Q969P0 613 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 RNF157Q96PX1 679 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 XPO6Q96QU8 1125 aaKnown RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 LYSMD1Q96S90 227 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 VAT1Q99536 393 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 MGME1Q9BQP7 344 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 HDAC8Q9BY41 377 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 FAM129AQ9BZQ8 928 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 LACRTQ9GZZ8 138 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 TKTL2Q9H0I9 626 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 MUC3BQ9H195 1237 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 RSPH9Q9H1X1 276 aaPredicted RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 IFT22Q9H7X7 185 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 KLHL11Q9NVR0 708 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 DDIT4Q9NX09 232 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 FEZ2Q9UHY8 353 aaPredicted RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 GGA2Q9UJY4 613 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 RIMKLBQ9ULI2 386 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 FZD4Q9ULV1 537 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 RPL26L1Q9UNX3 145 aaKnown RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 AP4E1Q9UPM8 1137 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 DRG1Q9Y295 367 aaKnown RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 SH3BP1Q9Y3L3 701 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 COL6A3P12111 3177 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 F5H5T6 163 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 AGRPO00253 132 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 MTSS1O43312 755 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 AKR1B10O60218 316 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 SASH3O75995 380 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 HOXC4P09017 264 aaPredicted RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 RARAP10276 462 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 PYGMP11217 842 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 SFTPCP11686 197 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 ARSAP15289 507 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 BPIP17213 487 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 PSMA2P25787 234 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 TARSP26639 723 aaKnown RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 SGSHP51688 502 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 EFEMP1Q12805 493 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 NOMO1Q15155 1222 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 LONRF1Q17RB8 773 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 ANKRD20A8PQ5CZ79 823 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 TRIM61Q5EBN2 209 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 PITRM1Q5JRX3 1037 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 PMS2CLQ68D20 193 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 TMEM215Q68D42 235 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 FGD2Q7Z6J4 655 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 C12orf40Q86WS4 652 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 ZNF843Q8N446 348 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 PCDH20Q8N6Y1 951 aaKnown RBP3.55□□□□□ -1.84
CCDC66-202ENST00000341455 SLC35B2Q8TB61 432 aa3.55□□□□□ -1.84
CCDC66-202ENST00000341455 MAIP1Q8WWC4 291 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms