RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 RD3Q7Z3Z2 195 aa13.18□□□□□ -0.3
NECTIN1-203ENST00000341398 ARL10Q8N8L6 244 aa13.18□□□□□ -0.3
NECTIN1-203ENST00000341398 TUBGCP5Q96RT8 1024 aa13.18□□□□□ -0.3
NECTIN1-203ENST00000341398 EIF3CQ99613 913 aaKnown RBP13.18□□□□□ -0.3
NECTIN1-203ENST00000341398 APOOQ9BUR5 198 aa13.18□□□□□ -0.3
NECTIN1-203ENST00000341398 EDEM3Q9BZQ6 932 aa13.18□□□□□ -0.3
NECTIN1-203ENST00000341398 STRADBQ9C0K7 418 aa13.18□□□□□ -0.3
NECTIN1-203ENST00000341398 CLPBQ9H078 707 aa13.18□□□□□ -0.3
NECTIN1-203ENST00000341398 KLC2Q9H0B6 622 aa13.18□□□□□ -0.3
NECTIN1-203ENST00000341398 ATP13A3Q9H7F0 1226 aa13.18□□□□□ -0.3
NECTIN1-203ENST00000341398 LIMA1Q9UHB6 759 aaKnown RBP13.18□□□□□ -0.3
NECTIN1-203ENST00000341398 CFAP69A5D8W1 941 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 LGALS16A8MUM7 142 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 PALMO75781 387 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 ITIH2P19823 946 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 KELP23276 732 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 SERPINA4P29622 427 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 CSNK1DP48730 415 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 SRP54P61011 504 aaKnown RBP13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 RPL7AP62424 266 aaKnown RBP13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 MYL5Q02045 173 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 EIF3IQ13347 325 aaKnown RBP13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 INPP5AQ14642 412 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 NFATC4Q14934 902 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 AGERQ15109 404 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 MCOLN2Q8IZK6 566 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 TSACCQ96A04 125 aaPredicted RBP13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 EXOC2Q96KP1 924 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 GFM1Q96RP9 751 aaKnown RBP13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 ERGIC2Q96RQ1 377 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 CPNE5Q9HCH3 593 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 PCDH12Q9NPG4 1184 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 PARVAQ9NVD7 372 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 LHX3Q9UBR4 397 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 KLQ9UEF7 1012 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 GPR34Q9UPC5 381 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 COQ6Q9Y2Z9 468 aa13.17□□□□□ -0.3
NECTIN1-203ENST00000341398 TSPAN11A1L157 253 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 LRRC10BA6NIK2 292 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 INSIG1O15503 277 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 PRAMEF11O60813 436 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 RNF8O76064 485 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 TNFSF15O95150 251 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 PIGNO95427 931 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 C6P13671 934 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 LIG3P49916 1009 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 MTM1Q13496 603 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 WSCD2Q2TBF2 565 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 ERMARDQ5T6L9 678 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 SRLQ86TD4 932 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 NETO2Q8NC67 525 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 VOPP1Q96AW1 172 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 WDR92Q96MX6 357 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 LMBRD1Q9NUN5 540 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 SIRPGQ9P1W8 387 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 AP4E1Q9UPM8 1137 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 ATP8A1Q9Y2Q0 1164 aa13.16□□□□□ -0.3
NECTIN1-203ENST00000341398 TCRBV5S1A1TA0A578 114 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 CDRT15L2A8MXV6 281 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 J3KR12 359 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 CACNB4O00305 520 aaPredicted RBP13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 PDE2AO00408 941 aaPredicted RBP13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 EEF2KO00418 725 aaKnown RBP13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 NTN3O00634 580 aaPredicted RBP13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 C1QL1O75973 258 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 ITGA2BP08514 1039 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 PSMA2P25787 234 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 NFKBIAP25963 317 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 PAPOLAP51003 745 aaKnown RBP13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 RENBPP51606 427 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 ZNF135P52742 658 aaPredicted RBP13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 BCL2L1Q07817 233 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 NSUN2Q08J23 767 aaKnown RBP eCLIP13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 RFTN1Q14699 578 aaPredicted RBP13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 STX1AQ16623 288 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 ALG11Q2TAA5 492 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 PPP1R15BQ5SWA1 713 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 CCDC81Q6ZN84 652 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 CLEC17AQ6ZS10 378 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 CAMK1DQ8IU85 385 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 ZNF843Q8N446 348 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 FBXO39Q8N4B4 442 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 PCDH19Q8TAB3 1148 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 LIN37Q96GY3 246 aaPredicted RBP13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 TMEM74Q96NL1 305 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 CINPQ9BW66 212 aaPredicted RBP13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 DHX35Q9H5Z1 703 aaKnown RBP13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 LRRC19Q9H756 370 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 SP110Q9HB58 689 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 KCTD5Q9NXV2 234 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 PNMA8BQ9ULN7 279 aaPredicted RBP13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 MYO6Q9UM54 1294 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 MGAQ8IWI9 3026 aa13.15□□□□□ -0.3
NECTIN1-203ENST00000341398 COL27A1Q8IZC6 1860 aaPredicted RBP13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 PLD2O14939 933 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 PRPSAP2O60256 369 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 BUB1BO60566 1050 aaPredicted RBP13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 PCCBP05166 539 aa13.14□□□□□ -0.31
NECTIN1-203ENST00000341398 ELFN1P0C7U0 828 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms