RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CXXC1Q9P0U4 656 aaPredicted RBP16.44■□□□□ 0.22
LITAF-201ENST00000339430 ADAMTS6Q9UKP5 1117 aa16.44■□□□□ 0.22
LITAF-201ENST00000339430 J3KR12 359 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 CCL22O00626 93 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 MAP3K13O43283 966 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 PRDX6P30041 224 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 SLC12A2P55011 1212 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 CSHL1Q14406 222 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 ACAD11Q709F0 780 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 BEND5Q7L4P6 421 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 DDX50Q9BQ39 737 aaKnown RBP16.43■□□□□ 0.22
LITAF-201ENST00000339430 TTPALQ9BTX7 342 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 NOL6Q9H6R4 1146 aaKnown RBP16.43■□□□□ 0.22
LITAF-201ENST00000339430 CYP4F12Q9HCS2 524 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 FBXO5Q9UKT4 447 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 KCNU1A8MYU2 1149 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 HNRNPLP14866 589 aaKnown RBP eCLIP16.43■□□□□ 0.22
LITAF-201ENST00000339430 PAMP19021 973 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 MSX2P35548 267 aaPredicted RBP16.43■□□□□ 0.22
LITAF-201ENST00000339430 PEX19P40855 299 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 ARPP19P56211 112 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 RPS27LQ71UM5 84 aaKnown RBP16.43■□□□□ 0.22
LITAF-201ENST00000339430 DCP1BQ8IZD4 617 aaKnown RBP16.43■□□□□ 0.22
LITAF-201ENST00000339430 TXNDC5Q8NBS9 432 aaKnown RBP16.43■□□□□ 0.22
LITAF-201ENST00000339430 C2CD4AQ8NCU7 369 aaPredicted RBP16.43■□□□□ 0.22
LITAF-201ENST00000339430 PABPC5Q96DU9 382 aaKnown RBP16.43■□□□□ 0.22
LITAF-201ENST00000339430 VN1R3Q9BXE9 311 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 UBE2OQ9C0C9 1292 aaKnown RBP16.43■□□□□ 0.22
LITAF-201ENST00000339430 POMKQ9H5K3 350 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 SLC24A3Q9HC58 644 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 CDYLQ9Y232 598 aa16.43■□□□□ 0.22
LITAF-201ENST00000339430 DOCK4Q8N1I0 1966 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 CNTN5O94779 1100 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 HAPLN1P10915 354 aaPredicted RBP16.42■□□□□ 0.22
LITAF-201ENST00000339430 COL6A2P12110 1019 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 CRABP2P29373 138 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 CD86P42081 329 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 MTTPP55157 894 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 LBRQ14739 615 aaKnown RBP16.42■□□□□ 0.22
LITAF-201ENST00000339430 FAM219BQ5XKK7 198 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 NEPROQ6NW34 567 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 PRSS55Q6UWB4 352 aaPredicted RBP16.42■□□□□ 0.22
LITAF-201ENST00000339430 CMTR2Q8IYT2 770 aaKnown RBP16.42■□□□□ 0.22
LITAF-201ENST00000339430 HMCESQ96FZ2 354 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 ZNF558Q96NG5 402 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 OLFM1Q99784 485 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 GTSE1Q9NYZ3 720 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 SCOCQ9UIL1 159 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 PTPRSQ13332 1948 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 CFLARO15519 480 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 THRAP10827 490 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 CPB1P15086 417 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 MLLT6P55198 1093 aaPredicted RBP16.42■□□□□ 0.22
LITAF-201ENST00000339430 USP46P62068 366 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 SLC10A7Q0GE19 358 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 SH2D4BQ5SQS7 431 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 TMEM240Q5SV17 173 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 AFMIDQ63HM1 303 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 RSPO2Q6UXX9 243 aaPredicted RBP16.42■□□□□ 0.22
LITAF-201ENST00000339430 LDB1Q86U70 411 aaPredicted RBP16.42■□□□□ 0.22
LITAF-201ENST00000339430 RCN3Q96D15 328 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 SERPINB11Q96P15 392 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 MRPL46Q9H2W6 279 aaKnown RBP16.42■□□□□ 0.22
LITAF-201ENST00000339430 VCXQ9H320 206 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 EBF3Q9H4W6 596 aa16.42■□□□□ 0.22
LITAF-201ENST00000339430 SUDS3Q9H7L9 328 aaPredicted RBP16.42■□□□□ 0.22
LITAF-201ENST00000339430 RGSL1A5PLK6 1076 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 TBX18O95935 607 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 ZCCHC18P0CG32 403 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 ARSAP15289 507 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 PEX2P28328 305 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 PLK1P53350 603 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 DSC2Q02487 901 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 PSMD5Q16401 504 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 ALFQ53S48 1182 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 RNF220Q5VTB9 566 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 KIAA0930Q6ICG6 404 aaPredicted RBP16.41■□□□□ 0.22
LITAF-201ENST00000339430 KDELC1Q6UW63 502 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 PTAR1Q7Z6K3 402 aaPredicted RBP16.41■□□□□ 0.22
LITAF-201ENST00000339430 DSELQ8IZU8 1212 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 RNF148Q8N7C7 305 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 GATA6Q92908 595 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 OR6C75A6NL08 312 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 SOAT2O75908 522 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 GJB5O95377 273 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 EFEMP2O95967 443 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 PEX11BO96011 259 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 HMBSP08397 361 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 ENO3P13929 434 aaPredicted RBP16.41■□□□□ 0.22
LITAF-201ENST00000339430 PPARGP37231 505 aaPredicted RBP16.41■□□□□ 0.22
LITAF-201ENST00000339430 PRKAA2P54646 552 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 NSUN2Q08J23 767 aaKnown RBP eCLIP16.41■□□□□ 0.22
LITAF-201ENST00000339430 EFEMP1Q12805 493 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 CYLC2Q14093 348 aaPredicted RBP16.41■□□□□ 0.22
LITAF-201ENST00000339430 IHHQ14623 411 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 NFE2Q16621 373 aaPredicted RBP16.41■□□□□ 0.22
LITAF-201ENST00000339430 USP41Q3LFD5 358 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 SFT2D3Q587I9 215 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 ANKS3Q6ZW76 656 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 TTC9BQ8N6N2 239 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms