RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 NEMP2A6NFY4 417 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 A8MUI8 341 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 TRIM24O15164 1050 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 TMCC1O94876 653 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 SERPINF2P08697 491 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CD1EP15812 388 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CR2P20023 1033 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 SLC1A6P48664 564 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 AQP5P55064 265 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 USP4Q13107 963 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 NAB1Q13506 487 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 FRG1Q14331 258 aaKnown RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CBX2Q14781 532 aaPredicted RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CTC1Q2NKJ3 1217 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 TMEM207Q6UWW9 146 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 Q6ZNB5 142 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 MAVSQ7Z434 540 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 FSTL5Q8N475 847 aaPredicted RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 MICAL1Q8TDZ2 1067 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 DDI1Q8WTU0 396 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 ANKRD49Q8WVL7 239 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CLP1Q92989 425 aaKnown RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 FATE1Q969F0 183 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 ALG14Q96F25 216 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 PPP1R36Q96LQ0 422 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 GPR78Q96P69 363 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 SORT1Q99523 831 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 TMEM106CQ9BVX2 250 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CINPQ9BW66 212 aaPredicted RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 TASP1Q9H6P5 420 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 NMRAL1Q9HBL8 299 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 SLC40A1Q9NP59 571 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 DONSONQ9NYP3 566 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 PLXNA4Q9HCM2 1894 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 NOTCH4Q99466 2003 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 KIAA1671Q9BY89 1806 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CCDC162PA2VCL2 907 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 A8MX80 341 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 KLF11O14901 512 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 TLL1O43897 1013 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 GOT2P00505 430 aaKnown RBP7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 LRG1P02750 347 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CHRNGP07510 517 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 TROVE2P10155 538 aaKnown RBP eCLIP7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CPA3P15088 417 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 ABL2P42684 1182 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 KCNC1P48547 511 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 ARFIP2P53365 341 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CSE1LP55060 971 aaKnown RBP7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CDKN2DP55273 166 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 TNK2Q07912 1038 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 SLC5A9Q2M3M2 681 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 FYB2Q5VWT5 728 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 KIAA0930Q6ICG6 404 aaPredicted RBP7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CLNKQ7Z7G1 428 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 RBM23Q86U06 439 aaKnown RBP7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CILP2Q8IUL8 1156 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 PPP1R14CQ8TAE6 165 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 POF1BQ8WVV4 589 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 NMUR2Q9GZQ4 415 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 FAM96AQ9H5X1 160 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 VPS51Q9UID3 782 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 DNAJC16Q9Y2G8 782 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 INSL6Q9Y581 213 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 OR51B4Q9Y5P0 310 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 MYO15AQ9UKN7 3530 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 GFRA2O00451 464 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 BIRC5O15392 142 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 TIMM44O43615 452 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 ZNF189O75820 626 aaPredicted RBP7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 OLFM2O95897 454 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 S1PR4O95977 384 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 RALBP11234 206 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 KCNA5P22460 613 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CD70P32970 193 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CTNNB1P35222 781 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CTSOP43234 321 aaPredicted RBP7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 PRAMEP78395 509 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 TIAL1Q01085 375 aaKnown RBP eCLIP7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 TRAF2Q12933 501 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CDH18Q13634 790 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CSHL1Q14406 222 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CAMK1DQ8IU85 385 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 HERC6Q8IVU3 1022 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 C7orf61Q8IZ16 206 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CMTM8Q8IZV2 173 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 OR4K2Q8NGD2 314 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 UTP4Q969X6 686 aaKnown RBP7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 EID2BQ96D98 161 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CCDC97Q96F63 343 aaPredicted RBP7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CEP295NLQ96MC4 621 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 ZSWIM3Q96MP5 696 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 RASSF4Q9H2L5 321 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 LINC00597Q9H2U6 94 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 CERS4Q9HA82 394 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 MAN1C1Q9NR34 630 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 ARL8BQ9NVJ2 186 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 SEPT3Q9UH03 358 aa7.44□□□□□ -1.22
SRFBP1-201ENST00000339397 INTS6Q9UL03 887 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms