RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 TSEN2Q8NCE0 465 aaKnown RBP19.59■□□□□ 0.73
ITGA4-202ENST00000339307 TPCN2Q8NHX9 752 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 HCAR2Q8TDS4 363 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 ZNF653Q96CK0 615 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 ZNF578Q96N58 590 aaPredicted RBP19.59■□□□□ 0.73
ITGA4-202ENST00000339307 UBL7Q96S82 380 aaPredicted RBP19.59■□□□□ 0.73
ITGA4-202ENST00000339307 CLPBQ9H078 707 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 PRORYQ9H606 182 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 ATP13A3Q9H7F0 1226 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 SATB2Q9UPW6 733 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 TMEM110-MUSTN1A8MSY1 372 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 LMO7DNF2Z398 122 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 RIOK3O14730 519 aaKnown RBP19.59■□□□□ 0.73
ITGA4-202ENST00000339307 CELA2BP08218 269 aaPredicted RBP19.59■□□□□ 0.73
ITGA4-202ENST00000339307 RBMS1P29558 406 aaKnown RBP19.59■□□□□ 0.73
ITGA4-202ENST00000339307 MIPP30301 263 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 RGRP47804 291 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 LSSP48449 732 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 BCL2L1Q07817 233 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 KLHL30Q0D2K2 578 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 ELOCQ15369 112 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 BROXQ5VW32 411 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 NAT6Q93015 286 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 ATXN7L3BQ96GX2 97 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 TUBGCP5Q96RT8 1024 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 PEBP4Q96S96 227 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 APOOQ9BUR5 198 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 BOCQ9BWV1 1114 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 TRIM7Q9C029 511 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 WDR70Q9NW82 654 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 PADI4Q9UM07 663 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 ATP8A1Q9Y2Q0 1164 aa19.59■□□□□ 0.73
ITGA4-202ENST00000339307 TMEM191CA6NGB0 347 aa19.58■□□□□ 0.72
ITGA4-202ENST00000339307 A8MX80 341 aa19.58■□□□□ 0.72
ITGA4-202ENST00000339307 EIF3CLB5ME19 914 aaKnown RBP19.58■□□□□ 0.72
ITGA4-202ENST00000339307 RASGRP1O95267 797 aa19.58■□□□□ 0.72
ITGA4-202ENST00000339307 ALPIP09923 528 aa19.58■□□□□ 0.72
ITGA4-202ENST00000339307 PEX5P50542 639 aa19.58■□□□□ 0.72
ITGA4-202ENST00000339307 SCNN1BP51168 640 aa19.58■□□□□ 0.72
ITGA4-202ENST00000339307 HK3P52790 923 aa19.58■□□□□ 0.72
ITGA4-202ENST00000339307 ARHGAP36Q6ZRI8 547 aa19.58■□□□□ 0.72
ITGA4-202ENST00000339307 ZNF571Q7Z3V5 609 aaPredicted RBP19.58■□□□□ 0.72
ITGA4-202ENST00000339307 FSTL5Q8N475 847 aaPredicted RBP19.58■□□□□ 0.72
ITGA4-202ENST00000339307 ARFGAP1Q8N6T3 406 aa19.58■□□□□ 0.72
ITGA4-202ENST00000339307 EIF3CQ99613 913 aaKnown RBP19.58■□□□□ 0.72
ITGA4-202ENST00000339307 CCDC3Q9BQI4 270 aa19.58■□□□□ 0.72
ITGA4-202ENST00000339307 SYT11Q9BT88 431 aa19.58■□□□□ 0.72
ITGA4-202ENST00000339307 TMEM63CQ9P1W3 806 aa19.58■□□□□ 0.72
ITGA4-202ENST00000339307 KLQ9UEF7 1012 aa19.58■□□□□ 0.72
ITGA4-202ENST00000339307 SKILP12757 684 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 SRP54P61011 504 aaKnown RBP19.57■□□□□ 0.72
ITGA4-202ENST00000339307 TLE3Q04726 772 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 SPIDRQ14159 915 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 NFATC4Q14934 902 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 ALG11Q2TAA5 492 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 GPR155Q7Z3F1 870 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 ZSWIM9Q86XI8 627 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 ATL2Q8NHH9 583 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 PCDH19Q8TAB3 1148 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 KCNE4Q8WWG9 221 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 EDEM3Q9BZQ6 932 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 THSD1Q9NS62 852 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 GPR34Q9UPC5 381 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 SCINQ9Y6U3 715 aa19.57■□□□□ 0.72
ITGA4-202ENST00000339307 SHROOM3Q8TF72 1996 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 TSPAN11A1L157 253 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 SERPINC1P01008 464 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 TNFP01375 233 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 PRB1P04280 392 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 ELFN1P0C7U0 828 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 MMP12P39900 470 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 POLR2LP62875 67 aaKnown RBP19.56■□□□□ 0.72
ITGA4-202ENST00000339307 SKOR2Q2VWA4 1001 aaPredicted RBP19.56■□□□□ 0.72
ITGA4-202ENST00000339307 NYAP1Q6ZVC0 841 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 GKN2Q86XP6 184 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 NPWQ8N729 165 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 PDCD6IPQ8WUM4 868 aaKnown RBP19.56■□□□□ 0.72
ITGA4-202ENST00000339307 TBATAQ96M53 351 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 WDR92Q96MX6 357 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.56■□□□□ 0.72
ITGA4-202ENST00000339307 ZWILCHQ9H900 591 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 MOSPD1Q9UJG1 213 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 ENTPD2Q9Y5L3 495 aa19.56■□□□□ 0.72
ITGA4-202ENST00000339307 ASXL3Q9C0F0 2248 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 CASC3O15234 703 aaKnown RBP19.55■□□□□ 0.72
ITGA4-202ENST00000339307 KLK10O43240 276 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 GZMAP12544 262 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 CSNK1DP48730 415 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 ERVPABLB-1P60509 514 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 IL10RBQ08334 325 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 ACOX1Q15067 660 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 SMTNL2Q2TAL5 461 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 ARHGAP12Q8IWW6 846 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 ARL10Q8N8L6 244 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 KYQ8NBH2 561 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 PLA2G15Q8NCC3 412 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 SLC39A7Q92504 469 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 HSPH1Q92598 858 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 TRIM11Q96F44 468 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 NAP1L5Q96NT1 182 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms