RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 KCTD3Q9Y597 815 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 ARL5AQ9Y689 179 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 NUMBLQ9Y6R0 609 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 TTC34A8MYJ7 566 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 PRRT4C9JH25 899 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 BUD23O43709 281 aaKnown RBP14.78□□□□□ -0.04
CBX3-201ENST00000337620 GSRP00390 522 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 CREB1P16220 341 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 GJA4P35212 333 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 FRG1Q14331 258 aaKnown RBP14.78□□□□□ -0.04
CBX3-201ENST00000337620 NAIF1Q69YI7 327 aaPredicted RBP14.78□□□□□ -0.04
CBX3-201ENST00000337620 PDPK2PQ6A1A2 396 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 DPY19L3Q6ZPD9 716 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 MTSS1LQ765P7 747 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 MARK2Q7KZI7 788 aaKnown RBP14.78□□□□□ -0.04
CBX3-201ENST00000337620 NXPE3Q969Y0 559 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 MRGPRX3Q96LB0 322 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 AGAP2Q99490 1192 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 SELENOSQ9BQE4 189 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 TREX1Q9NSU2 369 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 TXNDC16Q9P2K2 825 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 ZNF180Q9UJW8 692 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 ADAM21Q9UKJ8 722 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 PLA2G4CQ9UP65 541 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 SLC8A2Q9UPR5 921 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 SPO11Q9Y5K1 396 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 A0A1W2PPM1 405 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 MROH6A6NGR9 719 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 LDB2O43679 373 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 PGLSO95336 258 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 ASLP04424 464 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 SERPINA4P29622 427 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 ABL2P42684 1182 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 RECQLP46063 649 aaPredicted RBP14.78□□□□□ -0.04
CBX3-201ENST00000337620 CCNHP51946 323 aaPredicted RBP14.78□□□□□ -0.04
CBX3-201ENST00000337620 LAMB3Q13751 1172 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 QPCTQ16769 361 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 TEDDM1Q5T9Z0 273 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 LGSNQ5TDP6 509 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 ZNF449Q6P9G9 518 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 KDM7AQ6ZMT4 941 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 NLRP9Q7RTR0 991 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 TRABD2AQ86V40 505 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 SUSD6Q92537 303 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 MYO19Q96H55 970 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 ZDHHC6Q9H6R6 413 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 PSAT1Q9Y617 370 aa14.78□□□□□ -0.04
CBX3-201ENST00000337620 TBC1D3BA6NDS4 549 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 TRAFD1O14545 582 aaPredicted RBP14.77□□□□□ -0.04
CBX3-201ENST00000337620 FZD6O60353 706 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 KRT37O76014 449 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 PAPSS2O95340 614 aaPredicted RBP14.77□□□□□ -0.04
CBX3-201ENST00000337620 POP4O95707 220 aaKnown RBP14.77□□□□□ -0.04
CBX3-201ENST00000337620 SLC4A1P02730 911 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 KCNA5P22460 613 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 ST8SIA6P61647 398 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 TMPRSS15P98073 1019 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 RAD51Q06609 339 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 NAB1Q13506 487 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 BMPR2Q13873 1038 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 PTPRRQ15256 657 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 SKIV2LQ15477 1246 aaKnown RBP14.77□□□□□ -0.04
CBX3-201ENST00000337620 PTPRNQ16849 979 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 ARMC3Q5W041 872 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 GLT6D1Q7Z4J2 308 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 ARFGAP2Q8N6H7 521 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 TRABDQ9H4I3 376 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 BRD9Q9H8M2 597 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 KCNK9Q9NPC2 374 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 EPS15L1Q9UBC2 864 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 PRUNE2Q8WUY3 3088 aa14.77□□□□□ -0.04
CBX3-201ENST00000337620 DENND4AQ7Z401 1863 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 CCL22O00626 93 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 AURKAO14965 403 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 SOCS5O75159 536 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 KRT38O76015 456 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 CRTAMO95727 393 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 MT-ND3P03897 115 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 SRPRAP08240 638 aaKnown RBP14.77□□□□□ -0.05
CBX3-201ENST00000337620 F7P08709 466 aaPredicted RBP14.77□□□□□ -0.05
CBX3-201ENST00000337620 SNRPAP09012 282 aaKnown RBP14.77□□□□□ -0.05
CBX3-201ENST00000337620 BRAFP15056 766 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 CTPS1P17812 591 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 ARNTP27540 789 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 OPRD1P41143 372 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 ARCN1P48444 511 aaKnown RBP14.77□□□□□ -0.05
CBX3-201ENST00000337620 THOC5Q13769 683 aaKnown RBP14.77□□□□□ -0.05
CBX3-201ENST00000337620 PTPRCAPQ14761 206 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 ITPRIPL2Q3MIP1 535 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 MROH9Q5TGP6 573 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 KIAA0930Q6ICG6 404 aaPredicted RBP14.77□□□□□ -0.05
CBX3-201ENST00000337620 PACS1Q6VY07 963 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 STRA8Q7Z7C7 330 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 C4orf33Q8N1A6 199 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 ZNF366Q8N895 744 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 CHST14Q8NCH0 376 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 MDGA1Q8NFP4 955 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 OR13J1Q8NGT2 312 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 OR2A12Q8NGT7 310 aa14.77□□□□□ -0.05
CBX3-201ENST00000337620 FRS2Q8WU20 508 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms