RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 PARD6BQ9BYG5 372 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 PLAC1Q9HBJ0 212 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 IL1RAPL1Q9NZN1 696 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 ANAPC5Q9UJX4 755 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 INVSQ9Y283 1065 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 LAMA1P25391 3075 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 NPIPB15A6NHN6 443 aaPredicted RBP16.62■□□□□ 0.25
SHOX-201ENST00000334060 C16orf96A6NNT2 1141 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 PIAS1O75925 651 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 TIMP2P16035 220 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 LHCGRP22888 699 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 MGAT1P26572 445 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 HSPA9P38646 679 aaKnown RBP16.62■□□□□ 0.25
SHOX-201ENST00000334060 GEMP55040 296 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 HNRNPH2P55795 449 aaKnown RBP16.62■□□□□ 0.25
SHOX-201ENST00000334060 MPP3Q13368 585 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 CST6Q15828 149 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 RASSF4Q9H2L5 321 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 CHRDQ9H2X0 955 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 ATP13A3Q9H7F0 1226 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 SYBUQ9NX95 663 aa16.62■□□□□ 0.25
SHOX-201ENST00000334060 DOCK9Q9BZ29 2069 aa16.61■□□□□ 0.25
SHOX-201ENST00000334060 CXorf51AA0A1B0GTR3 108 aa16.61■□□□□ 0.25
SHOX-201ENST00000334060 TARSL2A2RTX5 802 aaKnown RBP16.61■□□□□ 0.25
SHOX-201ENST00000334060 SUN1O94901 812 aa16.61■□□□□ 0.25
SHOX-201ENST00000334060 TAS2R38P59533 333 aa16.61■□□□□ 0.25
SHOX-201ENST00000334060 POU6F1Q14863 301 aa16.61■□□□□ 0.25
SHOX-201ENST00000334060 GLE1Q53GS7 698 aaKnown RBP16.61■□□□□ 0.25
SHOX-201ENST00000334060 OR2T3Q8NH03 318 aa16.61■□□□□ 0.25
SHOX-201ENST00000334060 EXOC4Q96A65 974 aa16.61■□□□□ 0.25
SHOX-201ENST00000334060 FUBP1Q96AE4 644 aaKnown RBP16.61■□□□□ 0.25
SHOX-201ENST00000334060 RMDN1Q96DB5 314 aa16.61■□□□□ 0.25
SHOX-201ENST00000334060 CPEB1Q9BZB8 566 aaKnown RBP16.61■□□□□ 0.25
SHOX-201ENST00000334060 RAB17Q9H0T7 212 aa16.61■□□□□ 0.25
SHOX-201ENST00000334060 MRPS17Q9Y2R5 130 aaKnown RBP16.61■□□□□ 0.25
SHOX-201ENST00000334060 GPR39O43194 453 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 ANXA9O76027 345 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 TPSB2P20231 275 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 SERPINA4P29622 427 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 HNF1BP35680 557 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 P2RY2P41231 377 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 TNNT3P45378 269 aaPredicted RBP16.6■□□□□ 0.25
SHOX-201ENST00000334060 DHX9Q08211 1270 aaKnown RBP16.6■□□□□ 0.25
SHOX-201ENST00000334060 HLTFQ14527 1009 aaKnown RBP eCLIP16.6■□□□□ 0.25
SHOX-201ENST00000334060 TPSAB1Q15661 275 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 ARMC12Q5T9G4 340 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 KIAA1324Q6UXG2 1013 aaKnown RBP16.6■□□□□ 0.25
SHOX-201ENST00000334060 ANKMY2Q8IV38 441 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 UNC5BQ8IZJ1 945 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 LRRC45Q96CN5 670 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 CASS4Q9NQ75 786 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 WHRNQ9P202 907 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 SLC2A6Q9UGQ3 507 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 SUN2Q9UH99 717 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 SLC8A2Q9UPR5 921 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 ARL5AQ9Y689 179 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 WDR87Q6ZQQ6 2873 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 CHURC1-FNTBB4DL54 471 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 PRPSAP1Q14558 356 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 ZNF805Q5CZA5 627 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 PIP5KL1Q5T9C9 394 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 AGBL4Q5VU57 503 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 CAPN12Q6ZSI9 719 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 SYT13Q7L8C5 426 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 CCDC25Q86WR0 208 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 PLPP6Q8IY26 295 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 BLOC1S5Q8TDH9 187 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 IFT43Q96FT9 208 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 FEM1CQ96JP0 617 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 LRRC40Q9H9A6 602 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 PCDH12Q9NPG4 1184 aa16.6■□□□□ 0.25
SHOX-201ENST00000334060 AAR2Q9Y312 384 aaKnown RBP16.6■□□□□ 0.25
SHOX-201ENST00000334060 CUL9Q8IWT3 2517 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 PRR23AA6NEV1 266 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 ANKRD66B4E2M5 251 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 CPP00450 1065 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 CA5AP35218 305 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 MAGEA3P43357 314 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 LRRC32Q14392 662 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 STARD3Q14849 445 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 CDKN3Q16667 212 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 UGP2Q16851 508 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 BBS9Q3SYG4 887 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 EOGTQ5NDL2 527 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 SDE2Q6IQ49 451 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.59■□□□□ 0.25
SHOX-201ENST00000334060 PPP1R21Q6ZMI0 780 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 METTL3Q86U44 580 aaKnown RBP16.59■□□□□ 0.25
SHOX-201ENST00000334060 SPNS2Q8IVW8 549 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 DNAAF3Q8N9W5 541 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 OSBPL6Q9BZF3 934 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 VPS45Q9NRW7 570 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 ZNF446Q9NWS9 450 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 B4GALT6Q9UBX8 382 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 COQ6Q9Y2Z9 468 aa16.59■□□□□ 0.25
SHOX-201ENST00000334060 K7ESF4 209 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 RNASEH2AO75792 299 aaKnown RBP16.58■□□□□ 0.25
SHOX-201ENST00000334060 CLDN7O95471 211 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 NDST3O95803 873 aa16.58■□□□□ 0.25
SHOX-201ENST00000334060 IVLP07476 585 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms