RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 FAM83EQ2M2I3 478 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 FAM43BQ6ZT52 329 aaPredicted RBP17.5■□□□□ 0.39
DDX28-201ENST00000332395 TXNDC5Q8NBS9 432 aaKnown RBP17.5■□□□□ 0.39
DDX28-201ENST00000332395 SGF29Q96ES7 293 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 TSPAN17Q96FV3 270 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 ZNF599Q96NL3 588 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 SHCBP1LQ9BZQ2 653 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 KCTD3Q9Y597 815 aa17.5■□□□□ 0.39
DDX28-201ENST00000332395 ZFP37Q9Y6Q3 630 aaPredicted RBP17.5■□□□□ 0.39
DDX28-201ENST00000332395 GOLGA8QA0A0J9YX86 632 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 GOLGA8OA6NCC3 632 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 F8W8V4 182 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 GOLGA8NF8WBI6 632 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 GJB5O95377 273 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 FGF1P05230 155 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 GLDCP23378 1020 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 HOXD9P28356 352 aaPredicted RBP17.49■□□□□ 0.39
DDX28-201ENST00000332395 SLC11A2P49281 568 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 TUFMP49411 452 aaKnown RBP17.49■□□□□ 0.39
DDX28-201ENST00000332395 ALDH7A1P49419 539 aaKnown RBP17.49■□□□□ 0.39
DDX28-201ENST00000332395 CCDC6Q16204 474 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 TRMT5Q32P41 509 aaKnown RBP17.49■□□□□ 0.39
DDX28-201ENST00000332395 USP41Q3LFD5 358 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 HECTD2Q5U5R9 776 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 LDB1Q86U70 411 aaPredicted RBP17.49■□□□□ 0.39
DDX28-201ENST00000332395 CCNYL1Q8N7R7 359 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 PDCD6IPQ8WUM4 868 aaKnown RBP17.49■□□□□ 0.39
DDX28-201ENST00000332395 CEP295NLQ96MC4 621 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 MAGEH1Q9H213 219 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 WDR55Q9H6Y2 383 aaPredicted RBP17.49■□□□□ 0.39
DDX28-201ENST00000332395 GPAMQ9HCL2 828 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 MARCH4Q9P2E8 410 aaPredicted RBP17.49■□□□□ 0.39
DDX28-201ENST00000332395 STOML1Q9UBI4 398 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 CHD5Q8TDI0 1954 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 A0A088AWK7 358 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 OR51F1A6NGY5 319 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 NEMP1O14524 444 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 GRID2O43424 1007 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 ATP5F1P24539 256 aaPredicted RBP17.49■□□□□ 0.39
DDX28-201ENST00000332395 CCL23P55773 120 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 SESN3P58005 492 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 GNA12Q03113 381 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 GALNT3Q14435 633 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 SLC14A2Q15849 920 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 TECRLQ5HYJ1 363 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 C6orf163Q5TEZ5 329 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 AGAP9Q5VTM2 703 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 ALG1LQ6GMV1 187 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 SPNS2Q8IVW8 549 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 LMNTD2Q8IXW0 634 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 PDZD8Q8NEN9 1154 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 OR7D4Q8NG98 312 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 OR52K2Q8NGK3 314 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 BLOC1S5Q8TDH9 187 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 PPP1R36Q96LQ0 422 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 PANX3Q96QZ0 392 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 LBHD1Q9BQE6 289 aaPredicted RBP17.49■□□□□ 0.39
DDX28-201ENST00000332395 NUF2Q9BZD4 464 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 POMKQ9H5K3 350 aa17.49■□□□□ 0.39
DDX28-201ENST00000332395 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.49■□□□□ 0.39
DDX28-201ENST00000332395 LOC100653049A0A140TA62 436 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 ZNF840PA6NDX5 716 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 SLCO1B7G3V0H7 640 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 NPHS1O60500 1241 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 KRT34O76011 436 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 EFEMP2O95967 443 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 S1PR4O95977 384 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 EPOP01588 193 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 LTA4HP09960 611 aaKnown RBP17.48■□□□□ 0.39
DDX28-201ENST00000332395 PRDX6P30041 224 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 CDH4P55283 916 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 ACVR1Q04771 509 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 KLF10Q13118 480 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 BTG3Q14201 252 aaPredicted RBP17.48■□□□□ 0.39
DDX28-201ENST00000332395 IL31Q6EBC2 164 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 ANO7Q6IWH7 933 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 RIPOR1Q6ZS17 1223 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 PIWIL4Q7Z3Z4 852 aaKnown RBP17.48■□□□□ 0.39
DDX28-201ENST00000332395 RNF135Q8IUD6 432 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 DENND1CQ8IV53 801 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 ZNF296Q8WUU4 475 aaPredicted RBP17.48■□□□□ 0.39
DDX28-201ENST00000332395 OVCA2Q8WZ82 227 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 TBATAQ96M53 351 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 VN1R3Q9BXE9 311 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 YIPF3Q9GZM5 350 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 UNC93B1Q9H1C4 597 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 NCKIPSDQ9NZQ3 722 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 VTI1BQ9UEU0 232 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 VWA7Q9Y334 891 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 ACTL7AQ9Y615 435 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 ARL5AQ9Y689 179 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 TANC1Q9C0D5 1861 aa17.48■□□□□ 0.39
DDX28-201ENST00000332395 NEMP2A6NFY4 417 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 ENO4A6NNW6 628 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 COCHO43405 550 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 FKTNO75072 461 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 TBX10O75333 385 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 UPP2O95045 317 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 SERPINF2P08697 491 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 CCDC166P0CW27 439 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms