RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 TTC3P53804 2025 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 ARL5CA6NH57 179 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 H3BSA7 217 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 PDLIM1O00151 329 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 F2P00734 622 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 PABPC4LP0CB38 370 aaKnown RBP12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 CES1P23141 567 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 THPOP40225 353 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 SERPINH1P50454 418 aaKnown RBP12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 RPS6KA3P51812 740 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 TRIM25Q14258 630 aaKnown RBP12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 DDR2Q16832 855 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 HECTD2Q5U5R9 776 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 B3GNT6Q6ZMB0 384 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 C14orf80Q86SX3 495 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 FAM47BQ8NA70 645 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 ADCY4Q8NFM4 1077 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 TSPAN14Q8NG11 270 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 ESAMQ96AP7 390 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 RMDN1Q96DB5 314 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 RPL10LQ96L21 214 aaKnown RBP12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 RPRD1AQ96P16 312 aaPredicted RBP12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 SEMA4BQ9NPR2 832 aaPredicted RBP12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 UXTQ9UBK9 157 aaPredicted RBP12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 RGS17Q9UGC6 210 aaPredicted RBP12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 J3KR12 359 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 CHRM3P20309 590 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 EEF1B2P24534 225 aaKnown RBP12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 POTEHQ6S545 545 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 LCA5Q86VQ0 697 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 DNAJB14Q8TBM8 379 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 CALML6Q8TD86 181 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 DLG3Q92796 817 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 NT5C3BQ969T7 300 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 EXOC2Q96KP1 924 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 TBATAQ96M53 351 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 CCDC28BQ9BUN5 200 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 PRDM16Q9HAZ2 1276 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 TMLHEQ9NVH6 421 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 ZDHHC7Q9NXF8 308 aa12.96□□□□□ -0.33
HMGCS1-201ENST00000325110 GOLGA8CPA6NN73 597 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 NRP2O60462 931 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 RBP1P09455 135 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 LINC00032P0C843 101 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 SLC5A3P53794 718 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 GALNT3Q14435 633 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 ZNF235Q14590 738 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 TMEM259Q4ZIN3 620 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 SLC39A12Q504Y0 691 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 LPCAT2Q7L5N7 544 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 PCYOX1LQ8NBM8 494 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 ANKRD49Q8WVL7 239 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 TSPAN17Q96FV3 270 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 SEPHS2Q99611 448 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 C1QTNF1Q9BXJ1 281 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 TNFRSF12AQ9NP84 129 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 VWA7Q9Y334 891 aa12.96□□□□□ -0.34
HMGCS1-201ENST00000325110 INPP4BO15327 924 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 BCAS2O75934 225 aaPredicted RBP12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 CD52P31358 61 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 CPT1AP50416 773 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 USP46P62068 366 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 SLC10A7Q0GE19 358 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 MYLK3Q32MK0 819 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 SPPL2CQ8IUH8 684 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 CANT1Q8WVQ1 401 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 EZH1Q92800 747 aaPredicted RBP12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 KCNA7Q96RP8 456 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 HBEGFQ99075 208 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 TIMM22Q9Y584 194 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 ANK1P16157 1881 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 A0A1W2PQH9 124 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 PRORSD1PA6NEY8 169 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 PPP6CO00743 305 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 MATN3O15232 486 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 CLIC3O95833 236 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 TBX18O95935 607 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 TFAP2AP05549 437 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 CCNCP24863 283 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 PRKAA2P54646 552 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 TPD52P55327 224 aaPredicted RBP12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 MYBPC1Q00872 1141 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 POU4F1Q01851 419 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 PSMD5Q16401 504 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 FSCN1Q16658 493 aaKnown RBP12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 TTC33Q6PID6 262 aaPredicted RBP12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 TMEM86AQ8N2M4 240 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 ZFP28Q8NHY6 868 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 RMND5BQ96G75 393 aaPredicted RBP12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 HAUS8Q9BT25 410 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 SLC25A23Q9BV35 468 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 CACNA2D2Q9NY47 1150 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 RRN3Q9NYV6 651 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 NDUFA13Q9P0J0 144 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 RIMS3Q9UJD0 308 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 RAB26Q9ULW5 256 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 PRRC2BQ5JSZ5 2229 aaKnown RBP12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 A0A087X1B8 175 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 E9PAM4 449 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 CASQ2O14958 399 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms