RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 RBM43Q6ZSC3 357 aaKnown RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 FAM124AQ86V42 546 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 RGL4Q8IZJ4 473 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 DSELQ8IZU8 1212 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 ATP6V1C2Q8NEY4 427 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 PLAGL2Q9UPG8 496 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 INTS1Q8N201 2190 aaKnown RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 ARHGEF5Q12774 1597 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 DOCK7Q96N67 2140 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 PURAQ00577 322 aaKnown RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 DPYSL3Q14195 570 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 INSCQ1MX18 579 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 SPANXN3Q5MJ09 141 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 MSANTD1Q6ZTZ1 278 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 SMYD1Q8NB12 490 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 DENND6BQ8NEG7 585 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 DIRAS2Q96HU8 199 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 DNAJC18Q9H819 358 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 TMCO1Q9UM00 188 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 CASKO14936 926 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 BMP10O95393 424 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 YBX3P16989 372 aaKnown RBP eCLIP7.94□□□□□ -1.14
CIITA-201ENST00000324288 TRIM43Q96BQ3 446 aaPredicted RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 NXNL1Q96CM4 212 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 PXMP2Q9NR77 195 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 DNAJC11Q9NVH1 559 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 HPF1Q9NWY4 346 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 CARD8Q9Y2G2 431 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 SPATA31A3Q5VYP0 1347 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 SLC25A27O95847 323 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 PPP2R2BQ00005 443 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 HSPA14Q0VDF9 509 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 NAB1Q13506 487 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 C6orf183Q5T699 404 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 ZZZ3Q8IYH5 903 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 HTR3CQ8WXA8 447 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 ATG10Q9H0Y0 220 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 DSN1Q9H410 356 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 TET3O43151 1660 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 PGRMC2O15173 223 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 CCDC166P0CW27 439 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 MUTP22033 750 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 TAS2R41P59536 307 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 NRG1Q02297 640 aaPredicted RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 DPYSQ14117 519 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 GALNTL5Q7Z4T8 443 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 PHF10Q8WUB8 498 aaKnown RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 CHMP1AQ9HD42 196 aaPredicted RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 WASF2Q9Y6W5 498 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 TNS3Q68CZ2 1445 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 DISP1Q96F81 1524 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 RGS14O43566 566 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 BUD31P41223 144 aaPredicted RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 MTHFRP42898 656 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 CXXC5Q7LFL8 322 aaKnown RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 OR10G6Q8NH81 332 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 TUBA8Q9NY65 449 aaPredicted RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 DMTF1Q9Y222 760 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 POLR2EP19388 210 aaKnown RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 ABRQ12979 859 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 EIF1ADQ8N9N8 165 aaKnown RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 KIAA0895Q8NCT3 520 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 VANGL1Q8TAA9 524 aaPredicted RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 NKD1Q969G9 470 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 REPS1Q96D71 796 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 SLC17A7Q9P2U7 560 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 INO80Q9ULG1 1556 aaPredicted RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 MSL3P1P0C860 447 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 CTSEP14091 401 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 IGFBP4P22692 258 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 NFIAQ12857 509 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 VPS72Q15906 364 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 ZNF484Q5JVG2 852 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 FBXO47Q5MNV8 452 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 ZNF549Q6P9A3 640 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 AFTPHQ6ULP2 937 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 CIR1Q86X95 450 aaPredicted RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 PTGR2Q8N8N7 351 aaPredicted RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 AP3S1Q92572 193 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 DLG3Q92796 817 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 GJD4Q96KN9 370 aaPredicted RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 OPTCQ9UBM4 332 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 VPS51Q9UID3 782 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 RBM7Q9Y580 266 aaKnown RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 CACNA1EQ15878 2313 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 PSMD9O00233 223 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 PRLRP16471 622 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 TTC23Q5W5X9 447 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 CNSTQ6PJW8 725 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 OR52L1Q8NGH7 329 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 OSBPL11Q9BXB4 747 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 ALG2Q9H553 416 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 ZDBF2Q9HCK1 2354 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 ZMYM2Q9UBW7 1377 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 ABHD14A-ACY1A0A1B0GW23 586 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 PRODHO43272 600 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 ZNF24P17028 368 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 DNAJB7Q7Z6W7 309 aaPredicted RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 NAT9Q9BTE0 207 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 GANQ9H2C0 597 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms