RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 DNMT3LQ9UJW3 386 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 IGKV6D-21A0A0A0MT36 114 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 MANSC4A6NHS7 340 aaPredicted RBP10.38□□□□□ -0.75
SF3B2-201ENST00000322535 H0YC42 278 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 ACOX3O15254 700 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 EIF3DO15371 548 aaKnown RBP eCLIP10.38□□□□□ -0.75
SF3B2-201ENST00000322535 SPAG6O75602 509 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 NADKO95544 446 aaPredicted RBP10.38□□□□□ -0.75
SF3B2-201ENST00000322535 SELLP14151 372 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 ELNP15502 786 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 CCNA2P20248 432 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 GSTM2P28161 218 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 CDH5P33151 784 aaPredicted RBP10.38□□□□□ -0.75
SF3B2-201ENST00000322535 TSPAN7P41732 249 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 BLVRAP53004 296 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 TPD52P55327 224 aaPredicted RBP10.38□□□□□ -0.75
SF3B2-201ENST00000322535 MRPS15P82914 257 aaKnown RBP10.38□□□□□ -0.75
SF3B2-201ENST00000322535 GTF2BQ00403 316 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 BMT2Q1RMZ1 405 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 UGT3A1Q6NUS8 523 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 HID1Q8IV36 788 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 PPM1NQ8N819 430 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 FANK1Q8TC84 345 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 LRTOMTQ8WZ04 291 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 VCPIP1Q96JH7 1222 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 IL12RB2Q99665 862 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 SEC22CQ9BRL7 303 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 TMEM246Q9BRR3 403 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 SYT11Q9BT88 431 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 TMEM121Q9BTD3 319 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 STRA6Q9BX79 667 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 KATNBL1Q9H079 304 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 DHX33Q9H6R0 707 aaKnown RBP10.38□□□□□ -0.75
SF3B2-201ENST00000322535 FNIP2Q9P278 1114 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 PCDH10Q9P2E7 1040 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 ZSWIM8A7E2V4 1837 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 PLXNB2O15031 1838 aa10.38□□□□□ -0.75
SF3B2-201ENST00000322535 IQANK1A0A1B0GTG1 560 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 TMEM88BA6NKF7 163 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 SLC22A1O15245 554 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 ALOX5P09917 674 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 IQCF3P0C7M6 154 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 MAPTP10636 758 aaKnown RBP10.37□□□□□ -0.75
SF3B2-201ENST00000322535 EEF1B2P24534 225 aaKnown RBP10.37□□□□□ -0.75
SF3B2-201ENST00000322535 SERPINB1P30740 379 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 RPL9P32969 192 aaKnown RBP10.37□□□□□ -0.75
SF3B2-201ENST00000322535 GNL1P36915 607 aaPredicted RBP10.37□□□□□ -0.75
SF3B2-201ENST00000322535 LIG4P49917 911 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 MYL7Q01449 175 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 TNFAIP2Q03169 654 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 GALNT2Q10471 571 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 SLC13A2Q13183 592 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 MAPRE1Q15691 268 aaKnown RBP10.37□□□□□ -0.75
SF3B2-201ENST00000322535 RSBN1Q5VWQ0 802 aaPredicted RBP10.37□□□□□ -0.75
SF3B2-201ENST00000322535 SLX4IPQ5VYV7 408 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 C17orf99Q6UX52 265 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 BEND5Q7L4P6 421 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 SLC47A2Q86VL8 602 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 SLC22A16Q86VW1 577 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 ARL6IP6Q8N6S5 226 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 TERB1Q8NA31 727 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 RDM1Q8NG50 284 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 LHFPL5Q8TAF8 219 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 ST8SIA2Q92186 375 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 TRIB2Q92519 343 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 C1orf50Q9BV19 199 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 THG1LQ9NWX6 298 aaKnown RBP10.37□□□□□ -0.75
SF3B2-201ENST00000322535 POLIQ9UNA4 740 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 ZNF839A8K0R7 811 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 ZBBXA8MT70 800 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 H3BRB1 525 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 ASNA1O43681 348 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 PGK1P00558 417 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 DHRS4L1P0CG22 281 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 KRT3P12035 628 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 KLRC2P26717 231 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 SOX11P35716 441 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 NUDT1P36639 197 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 TNFSF9P41273 254 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 LAMTOR4Q0VGL1 99 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 ZMYND11Q15326 602 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 TAF5Q15542 800 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 SMAD1Q15797 465 aaKnown RBP10.37□□□□□ -0.75
SF3B2-201ENST00000322535 SNRNP35Q16560 246 aaKnown RBP10.37□□□□□ -0.75
SF3B2-201ENST00000322535 ATP13A4Q4VNC1 1196 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 ANKRD22Q5VYY1 191 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 PPP4R3CPQ6ZMV5 832 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 STXBP4Q6ZWJ1 553 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 ARHGEF19Q8IW93 802 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 OFCC1Q8IZS5 231 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 MCPH1Q8NEM0 835 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 ADAM32Q8TC27 787 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 JPH3Q8WXH2 748 aaPredicted RBP10.37□□□□□ -0.75
SF3B2-201ENST00000322535 TBC1D20Q96BZ9 403 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 KLHL32Q96NJ5 620 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 NPLQ9BXD5 320 aaPredicted RBP10.37□□□□□ -0.75
SF3B2-201ENST00000322535 OR2B2Q9GZK3 357 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 DPEP3Q9H4B8 488 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 ERVMER34-1Q9H9K5 563 aa10.37□□□□□ -0.75
SF3B2-201ENST00000322535 PNPOQ9NVS9 261 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms