RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 CD86P42081 329 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 MGAT5BQ3V5L5 792 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 SYPL2Q5VXT5 272 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 FAM35AQ86V20 835 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 OFCC1Q8IZS5 231 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 HDAC10Q969S8 669 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 FCRL3Q96P31 734 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 SENP6Q9GZR1 1112 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 DNAJC5Q9H3Z4 198 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 HMG20AQ9NP66 347 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 ATAD3AQ9NVI7 634 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 LEF1Q9UJU2 399 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 CNOT6Q9ULM6 557 aaKnown RBP12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 DOLKQ9UPQ8 538 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 FAM50BQ9Y247 325 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 CXCL11O14625 94 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 EGFRP00533 1210 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 LINC00032P0C843 101 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 IL5RAQ01344 420 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 IKBKEQ14164 716 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 ZNF618Q5T7W0 954 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 TTC23Q5W5X9 447 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 SMYD5Q6GMV2 418 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 KIAA2013Q8IYS2 634 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 TBC1D21Q8IYX1 336 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 TMEM130Q8N3G9 435 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 ATP6V0D2Q8N8Y2 350 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 CENPNQ96H22 339 aaPredicted RBP12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 EIF2AQ9BY44 585 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 RAD21L1Q9H4I0 556 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 ZNF696Q9H7X3 374 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 EMCNQ9ULC0 261 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 EIF3LQ9Y262 564 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 TDRKHQ9Y2W6 561 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 PKP3Q9Y446 797 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 TCAF1Q9Y4C2 921 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 STX7O15400 261 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 RNASEH2AO75792 299 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 IL4RP24394 825 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 CDK9P50750 372 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 UGT2A3Q6UWM9 527 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 HASPINQ8TF76 798 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 HSPBAP1Q96EW2 488 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 PRICKLE1Q96MT3 831 aaPredicted RBP12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 ZMAT2Q96NC0 199 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 HNRNPABQ99729 332 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 PIGVQ9NUD9 493 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 SNX10Q9Y5X0 201 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 FKBP9O95302 570 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 AHSGP02765 367 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 IDO1P14902 403 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 HECTD2Q5U5R9 776 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 PTRHD1Q6GMV3 140 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 PGM2L1Q6PCE3 622 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 DCLRE1AQ6PJP8 1040 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 SCIMPQ6UWF3 145 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 NAPRTQ6XQN6 538 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 FKBP9P1Q75LS8 142 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 TMEM86AQ8N2M4 240 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 TOP6BLQ8N6T0 577 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 STAG3L4Q8TBR4 150 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 VPS33AQ96AX1 596 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 ROPN1LQ96C74 230 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 CASS4Q9NQ75 786 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 LATS2Q9NRM7 1088 aa12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 SMPD3Q9NY59 655 aaPredicted RBP12.8□□□□□ -0.36
DNMT3A-202ENST00000321117 C2orf81A6NN90 581 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 HCRTO43612 131 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 MT-ND1P03886 318 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 MAXP61244 160 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 FSCN1Q16658 493 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 KIAA0408Q6ZU52 694 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 OR56A4Q8NGH8 313 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 METTL6Q8TCB7 284 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 PTCD2Q8WV60 388 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 TOP1MTQ969P6 601 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 ITFG2Q969R8 447 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 SNX27Q96L92 541 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 SLC39A3Q9BRY0 314 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 HGH1Q9BTY7 390 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 UGT2B28Q9BY64 529 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 ZFYVE28Q9HCC9 887 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 AFF4Q9UHB7 1163 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 DYTNA2CJ06 578 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 BTN3A1O00481 513 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 HS6ST1O60243 411 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 PCNAP12004 261 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 CYP2B6P20813 491 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 CDH3P22223 829 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 SLC1A2P43004 574 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 PAFAH1B3Q15102 231 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 GPR158Q5T848 1215 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 DNAJC14Q6Y2X3 702 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 P3H2Q8IVL5 708 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 GTF3C2Q8WUA4 911 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 STYXQ8WUJ0 223 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 COX4I2Q96KJ9 171 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 KATNAL1Q9BW62 490 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 APOL5Q9BWW9 433 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 C8orf4Q9NR00 106 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms