RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 POTEHQ6S545 545 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 HPS6Q86YV9 775 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 ST13P4Q8IZP2 240 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 OR4L1Q8NH43 312 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 SUSD3Q96L08 255 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 PPP1R2P1Q96PQ5 205 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 PPP1R10Q96QC0 940 aaKnown RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 ECSITQ9BQ95 431 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 C17orf80Q9BSJ5 609 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 C2orf49Q9BVC5 232 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 SPATA16Q9BXB7 569 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 VRTNQ9H8Y1 702 aa11.07□□□□□ -0.64
TOP3A-201ENST00000321105 COPS7BQ9H9Q2 264 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 RCOR3Q9P2K3 495 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-201ENST00000321105 SAC3D1A6NKF1 404 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 CFAP99D6REC4 459 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 FKBP9O95302 570 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 IL4RP24394 825 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 CRHR1P34998 444 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 USP46P62068 366 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 WASHC5Q12768 1159 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 OTUD3Q5T2D3 398 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-201ENST00000321105 RBM20Q5T481 1227 aaKnown RBP11.06□□□□□ -0.64
TOP3A-201ENST00000321105 FKBP9P1Q75LS8 142 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 RBBP8Q99708 897 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.06□□□□□ -0.64
TOP3A-201ENST00000321105 DENND2DQ9H6A0 471 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-201ENST00000321105 CAAP1Q9H8G2 361 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 MYO1GB0I1T2 1018 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 FAM189A1O60320 539 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 WASP42768 502 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 PTDSS1P48651 473 aaKnown RBP11.06□□□□□ -0.64
TOP3A-201ENST00000321105 LIMK2P53671 638 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 MLLT6P55198 1093 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-201ENST00000321105 NRG1Q02297 640 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-201ENST00000321105 CPSF6Q16630 551 aaKnown RBP eCLIP11.06□□□□□ -0.64
TOP3A-201ENST00000321105 ARHGAP15Q53QZ3 475 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 RD3Q7Z3Z2 195 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 SPASTQ9UBP0 616 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 EGFL7Q9UHF1 273 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 APPL1Q9UKG1 709 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 RAI2Q9Y5P3 530 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 ARVCFO00192 962 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 INPP4BO15327 924 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 CLASP2O75122 1294 aaKnown RBP11.06□□□□□ -0.64
TOP3A-201ENST00000321105 GJB5O95377 273 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 AHSGP02765 367 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 NELFEP18615 380 aaKnown RBP11.06□□□□□ -0.64
TOP3A-201ENST00000321105 IL10P22301 178 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 GLUD2P49448 558 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 IL2P60568 153 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 IL27RAQ6UWB1 636 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 GPSM1Q86YR5 675 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 CAMK1DQ8IU85 385 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 NPAS4Q8IUM7 802 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 CLEC4FQ8N1N0 589 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 HEXDCQ8WVB3 486 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 PRR11Q96HE9 360 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-201ENST00000321105 TSC22D3Q99576 134 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 MAF1Q9H063 256 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 RNPEPL1Q9HAU8 725 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 TMEM51Q9NW97 253 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 TMEM161AQ9NX61 479 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 KLQ9UEF7 1012 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 SLC45A1Q9Y2W3 748 aa11.06□□□□□ -0.64
TOP3A-201ENST00000321105 NRAPQ86VF7 1730 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 MRASO14807 208 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 STAU1O95793 577 aaKnown RBP11.05□□□□□ -0.64
TOP3A-201ENST00000321105 RHOQP17081 205 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 ATP5F1P24539 256 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-201ENST00000321105 PITRM1Q5JRX3 1037 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 HECTD2Q5U5R9 776 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 ITIH5Q86UX2 942 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 ZNF296Q8WUU4 475 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-201ENST00000321105 KHSRPQ92945 711 aaKnown RBP eCLIP11.05□□□□□ -0.643e-7■■■■□ 22.5
TOP3A-201ENST00000321105 VPS50Q96JG6 964 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 FCRL3Q96P31 734 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-201ENST00000321105 LENG8Q96PV6 779 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-201ENST00000321105 GPR21Q99679 349 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 TAS2R1Q9NYW7 299 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 POLR2AP24928 1970 aaKnown RBP11.05□□□□□ -0.64
TOP3A-201ENST00000321105 ACSL4O60488 711 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 PCDH8O95206 1070 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 MT-ND1P03886 318 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 HGFP14210 728 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 CREB5Q02930 508 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 LAMB3Q13751 1172 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 PGS1Q32NB8 556 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 MORN1Q5T089 497 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 RINLQ6ZS11 566 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 C2orf73Q8N5S3 287 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-201ENST00000321105 CLDN19Q8N6F1 224 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 ZMIZ2Q8NF64 920 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 SGIP1Q9BQI5 828 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 ADNPQ9H2P0 1102 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 ARL15Q9NXU5 204 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 hCG_2014768A0A024R1R8 64 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 MBLAC1A4D2B0 266 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-201ENST00000321105 ZNF197O14709 1029 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms