RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CORO1CQ9ULV4 474 aaPredicted RBP17.93■□□□□ 0.46
RAB39A-201ENST00000320578 CLEC4EQ9ULY5 219 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 ARL2BPQ9Y2Y0 163 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 MRPS23Q9Y3D9 190 aaKnown RBP17.93■□□□□ 0.46
RAB39A-201ENST00000320578 PROCP04070 461 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 APOA4P06727 396 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 CD70P32970 193 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 ZNF140P52738 457 aaPredicted RBP17.93■□□□□ 0.46
RAB39A-201ENST00000320578 SULT2A1Q06520 285 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 TRAF2Q12933 501 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 CTBP1Q13363 440 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 ZKSCAN8Q15776 578 aaPredicted RBP17.93■□□□□ 0.46
RAB39A-201ENST00000320578 PITRM1Q5JRX3 1037 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 N4BP2L1Q5TBK1 243 aaPredicted RBP17.93■□□□□ 0.46
RAB39A-201ENST00000320578 CGB2Q6NT52 195 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 RIN3Q8TB24 985 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 ZNF398Q8TD17 642 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 RMDN1Q96DB5 314 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 TLE6Q9H808 572 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 TLK1Q9UKI8 766 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 HS3ST2Q9Y278 367 aa17.93■□□□□ 0.46
RAB39A-201ENST00000320578 FCF1Q9Y324 198 aaKnown RBP17.93■□□□□ 0.46
RAB39A-201ENST00000320578 NOTCH4Q99466 2003 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 C2orf81A6NN90 581 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 SOCS5O75159 536 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 PRAMEF12O95522 483 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 GSRP00390 522 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 MT-CO1P00395 513 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 OGNP20774 298 aaKnown RBP17.92■□□□□ 0.46
RAB39A-201ENST00000320578 ARSDP51689 593 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 NTHL1P78549 312 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 MPP1Q00013 466 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 KCNC3Q14003 757 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 USP10Q14694 798 aaKnown RBP17.92■□□□□ 0.46
RAB39A-201ENST00000320578 SMAD1Q15797 465 aaKnown RBP17.92■□□□□ 0.46
RAB39A-201ENST00000320578 TAF1BQ53T94 588 aaPredicted RBP17.92■□□□□ 0.46
RAB39A-201ENST00000320578 PPM1JQ5JR12 505 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 MRNIPQ6NTE8 343 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 KIAA0907Q7Z7F0 614 aaPredicted RBP17.92■□□□□ 0.46
RAB39A-201ENST00000320578 CMC1Q7Z7K0 106 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 TMEM25Q86YD3 366 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 NUDCD3Q8IVD9 361 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 ARID3BQ8IVW6 561 aaPredicted RBP17.92■□□□□ 0.46
RAB39A-201ENST00000320578 CELF5Q8N6W0 485 aaKnown RBP17.92■□□□□ 0.46
RAB39A-201ENST00000320578 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.92■□□□□ 0.46
RAB39A-201ENST00000320578 SMG7Q92540 1137 aaKnown RBP17.92■□□□□ 0.46
RAB39A-201ENST00000320578 CEP44Q9C0F1 390 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 PLK2Q9NYY3 685 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 MID2Q9UJV3 735 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 SLC39A10Q9ULF5 831 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 PCDHGC4Q9Y5F7 938 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 ARL5AQ9Y689 179 aa17.92■□□□□ 0.46
RAB39A-201ENST00000320578 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.91■□□□□ 0.46
RAB39A-201ENST00000320578 FAM95CA0A1B0GW59 222 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.91■□□□□ 0.46
RAB39A-201ENST00000320578 WDR91A4D1P6 747 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 HTRA2O43464 458 aaPredicted RBP17.91■□□□□ 0.46
RAB39A-201ENST00000320578 CEBPBP17676 345 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 HLA-FP30511 346 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 GRIA4P48058 902 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 NUMBP49757 651 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 RAB10P61026 200 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 RAB30Q15771 203 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 FAM47EQ6ZV65 393 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 OTOAQ7RTW8 1153 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 ADGRD2Q7Z7M1 963 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 ADGRG2Q8IZP9 1017 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 TTC16Q8NEE8 873 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 BHMTQ93088 406 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 E2F7Q96AV8 911 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 TBATAQ96M53 351 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 SFXN1Q9H9B4 322 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 PIDD1Q9HB75 910 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 SLCO1B3Q9NPD5 702 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 DZANK1Q9NVP4 752 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 KLHL14Q9P2G3 628 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 MYLKQ15746 1914 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 GLP2RO95838 553 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 IGSF6O95976 241 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 PRKCGP05129 697 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 PDHA1P08559 390 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 NEFHP12036 1026 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 BGNP21810 368 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 LPOP22079 712 aaPredicted RBP17.91■□□□□ 0.46
RAB39A-201ENST00000320578 ARMC12Q5T9G4 340 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 PLPP6Q8IY26 295 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 LPCAT1Q8NF37 534 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 OR6P1Q8NGX9 317 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 RDH11Q8TC12 318 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 TSPAN17Q96FV3 270 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 ATXN7L3BQ96GX2 97 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 CDKN2AIPNLQ96HQ2 116 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 DNAJC1Q96KC8 554 aaKnown RBP17.91■□□□□ 0.46
RAB39A-201ENST00000320578 ZSWIM3Q96MP5 696 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 C7orf26Q96N11 449 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 TSSK1BQ9BXA7 367 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 MAGEE1Q9HCI5 957 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 TMEM216Q9P0N5 145 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 KCTD3Q9Y597 815 aa17.91■□□□□ 0.46
RAB39A-201ENST00000320578 SPO11Q9Y5K1 396 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms