RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SIX3O95343 332 aaPredicted RBP16.56■□□□□ 0.24
CLIP4-201ENST00000320081 CDH2P19022 906 aaPredicted RBP16.56■□□□□ 0.24
CLIP4-201ENST00000320081 CES1P23141 567 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 IDH2P48735 452 aaKnown RBP16.56■□□□□ 0.24
CLIP4-201ENST00000320081 MRPS15P82914 257 aaKnown RBP16.56■□□□□ 0.24
CLIP4-201ENST00000320081 STXBP5Q5T5C0 1151 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 KIAA2013Q8IYS2 634 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 LINGO1Q96FE5 620 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 PRR11Q96HE9 360 aaPredicted RBP16.56■□□□□ 0.24
CLIP4-201ENST00000320081 TEPSINQ96N21 525 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 QKIQ96PU8 341 aaKnown RBP eCLIP16.56■□□□□ 0.24
CLIP4-201ENST00000320081 YIPF2Q9BWQ6 316 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 HAPLN2Q9GZV7 340 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 TRPC4Q9UBN4 977 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 POLG2Q9UHN1 485 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 CDH22Q9UJ99 828 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 H7C4K7 107 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 TBL1XO60907 577 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 TNFAIP8O95379 198 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 ALDH6A1Q02252 535 aaKnown RBP16.56■□□□□ 0.24
CLIP4-201ENST00000320081 SLC25A11Q02978 314 aaKnown RBP16.56■□□□□ 0.24
CLIP4-201ENST00000320081 ARHGAP1Q07960 439 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 TUSC3Q13454 348 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 PTPRCAPQ14761 206 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 ARHGAP36Q6ZRI8 547 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 FAM47BQ8NA70 645 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 OR9Q1Q8NGQ5 310 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 PNPT1Q8TCS8 783 aaKnown RBP16.56■□□□□ 0.24
CLIP4-201ENST00000320081 ACMSDQ8TDX5 336 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 DCAKDQ8WVC6 231 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 MRPL57Q9BQC6 102 aaKnown RBP16.56■□□□□ 0.24
CLIP4-201ENST00000320081 ALG2Q9H553 416 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 INVSQ9Y283 1065 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 RAD51BO15315 384 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 CD3EAPO15446 510 aaKnown RBP16.56■□□□□ 0.24
CLIP4-201ENST00000320081 SERPINI2O75830 405 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 TM7SF2O76062 418 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 AP2A1O95782 977 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 RAB27AP51159 221 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 RAP1GDS1P52306 607 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 TRIM16LQ309B1 348 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 SLC9B1Q4ZJI4 515 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 RBM44Q6ZP01 1051 aaKnown RBP16.56■□□□□ 0.24
CLIP4-201ENST00000320081 SPPL2CQ8IUH8 684 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 WDTC1Q8N5D0 677 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 BPIFB6Q8NFQ5 453 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 MYRFQ9Y2G1 1151 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 TYMPP19971 482 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 DAOAP59103 153 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 RPL10LQ96L21 214 aaKnown RBP16.56■□□□□ 0.24
CLIP4-201ENST00000320081 SNX27Q96L92 541 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 OR52B2Q96RD2 323 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 SYT17Q9BSW7 474 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 PADI4Q9UM07 663 aa16.56■□□□□ 0.24
CLIP4-201ENST00000320081 ABCC6O95255 1503 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 KRT6AP02538 564 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 KRT6BP04259 564 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 CYP4B1P13584 511 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 CHI3L1P36222 383 aaPredicted RBP16.55■□□□□ 0.24
CLIP4-201ENST00000320081 KRT6CP48668 564 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 NEK3P51956 506 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 PQLC1Q8N2U9 271 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 PHTF2Q8N3S3 785 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 SLC2A6Q9UGQ3 507 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 RAD54BQ9Y620 910 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 NRP2O60462 931 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 PCDH8O95206 1070 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 ZNF280AP59817 542 aaPredicted RBP16.55■□□□□ 0.24
CLIP4-201ENST00000320081 FAM98BQ52LJ0 330 aaKnown RBP16.55■□□□□ 0.24
CLIP4-201ENST00000320081 HECTD3Q5T447 861 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 TRAPPC5Q8IUR0 188 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 MANSC4A6NHS7 340 aaPredicted RBP16.55■□□□□ 0.24
CLIP4-201ENST00000320081 AZIN1O14977 448 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 DEAF1O75398 565 aaPredicted RBP16.55■□□□□ 0.24
CLIP4-201ENST00000320081 ALOX15P16050 662 aaPredicted RBP16.55■□□□□ 0.24
CLIP4-201ENST00000320081 MC4RP32245 332 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 HSPA13P48723 471 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 CLEC20AQ6ZU45 233 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 ZDHHC13Q8IUH4 622 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 ARRDC4Q8NCT1 418 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 HEXDCQ8WVB3 486 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 SPAG4Q9NPE6 437 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 ARHGEF3Q9NR81 526 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 USE1Q9NZ43 259 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 GIMAP2Q9UG22 337 aa16.55■□□□□ 0.24
CLIP4-201ENST00000320081 C5orf60A6NFR6 353 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 MEIS3P2A8K0S8 358 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 E9PAM4 449 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 MAN1A2O60476 641 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 CHN2P52757 468 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 LIMK2P53671 638 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 HECTD2Q5U5R9 776 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 TOP6BLQ8N6T0 577 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 OR4L1Q8NH43 312 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 TMEM159Q96B96 161 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 GPR21Q99679 349 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 CORO1BQ9BR76 489 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 KANSL3Q9P2N6 904 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 UBXN8O00124 270 aa16.54■□□□□ 0.24
CLIP4-201ENST00000320081 BIRC5O15392 142 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms