RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ITGB1P05556 798 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ADRA2AP08913 450 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 PHBP35232 272 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 GP5P40197 560 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 C21orf58P58505 322 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 USP4Q13107 963 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 DGKDQ16760 1214 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ZNF667Q5HYK9 610 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 IL23RQ5VWK5 629 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 LIPMQ5VYY2 423 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 SCARA5Q6ZMJ2 495 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ZC3H18Q86VM9 953 aaKnown RBP7.89□□□□□ -1.15
CNOT4-201ENST00000315544 MINDY1Q8N5J2 469 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 BMPERQ8N8U9 685 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 KCTD6Q8NC69 237 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 SPDYE1Q8NFV5 336 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-201ENST00000315544 PPP2R3CQ969Q6 453 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 FUBP1Q96AE4 644 aaKnown RBP7.89□□□□□ -1.15
CNOT4-201ENST00000315544 CCDC97Q96F63 343 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-201ENST00000315544 TMEM209Q96SK2 561 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 KCNK16Q96T55 309 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ASPSCR1Q9BZE9 553 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 CAB39LQ9H9S4 337 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 KCNE1BA0A087WTH5 132 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 F8W810 466 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 H7C0S8 307 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 RPS17P08708 135 aaKnown RBP7.89□□□□□ -1.15
CNOT4-201ENST00000315544 TFEBP19484 476 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 MYF6P23409 242 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 PIK3R1P27986 724 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 RDXP35241 583 aaKnown RBP7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ERVK-21P61565 698 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 SH3BP2P78314 561 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 RHDQ02161 417 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 TFDP2Q14188 446 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ZNF678Q5SXM1 525 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 KIAA0930Q6ICG6 404 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-201ENST00000315544 POTEHQ6S545 545 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 Q6ZNX1 250 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 RSPH3Q86UC2 560 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ARID3BQ8IVW6 561 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ADGRG5Q8IZF4 528 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 DEFB106AQ8N104 65 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 NETO2Q8NC67 525 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 RP9Q8TA86 221 aaKnown RBP7.89□□□□□ -1.15
CNOT4-201ENST00000315544 JADE3Q92613 823 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 SLC35B4Q969S0 331 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ZUFSPQ96AP4 578 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ANKRD36BP1Q96IX9 119 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 NAT9Q9BTE0 207 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 RHOJQ9H4E5 214 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 CWH43Q9H720 699 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 PAK1IP1Q9NWT1 392 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-201ENST00000315544 DCTN4Q9UJW0 460 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-201ENST00000315544 TMEM233B4DJY2 109 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 CLDN5O00501 218 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 NME4O00746 187 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 EFCAB14O75071 495 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ARHGEF15O94989 841 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 CYP2C9P11712 490 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 LCP1P13796 627 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 MPSTP25325 297 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 SLC1A2P43004 574 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 MAGEA2P43356 314 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 RABGGTBP53611 331 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 KLC1Q07866 573 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ARL13AQ5H913 290 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ZNF280DQ6N043 979 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 C1orf228Q6PIY5 440 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 TBPL2Q6SJ96 375 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 SATL1Q86VE3 508 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 KIAA2013Q8IYS2 634 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 OR52K1Q8NGK4 314 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 SPATA33Q96N06 139 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 TMEM74Q96NL1 305 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 FNBP1Q96RU3 617 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 INSM2Q96T92 566 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ADPGKQ9BRR6 497 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 COLEC11Q9BWP8 271 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 VN1R3Q9BXE9 311 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 CNGB3Q9NQW8 809 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 DNAJC16Q9Y2G8 782 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 CKAP5Q14008 2032 aa7.89□□□□□ -1.15
CNOT4-201ENST00000315544 ERCC2P18074 760 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 IL1RNP18510 177 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 ATP6V1B2P21281 511 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 HOXD9P28356 352 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 GRIA3P42263 894 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 FOXA1P55317 472 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 ZXDBP98169 803 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 IKBKEQ14164 716 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 RCAN2Q14206 197 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 ADRM1Q16186 407 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 DNAL1Q4LDG9 190 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 EFHC1Q5JVL4 640 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 FBXO47Q5MNV8 452 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 TMEM198Q66K66 360 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 FAM117BQ6P1L5 589 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 KLHDC10Q6PID8 442 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms