RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 FNDC5Q8NAU1 212 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 OR6Y1Q8NGX8 325 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 FUBP3Q96I24 572 aaKnown RBP eCLIP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 SPATA16Q9BXB7 569 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 MRGBPQ9NV56 204 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 TMEM114B3SHH9 223 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 TRIP4Q15650 581 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 NKAPQ8N5F7 415 aaKnown RBP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 VPS45Q9NRW7 570 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 FCF1Q9Y324 198 aaKnown RBP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 CPQQ9Y646 472 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 SYN3O14994 580 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 LBPP18428 481 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 PSME3P61289 254 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 ZNF212Q9UDV6 495 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 TIMM22Q9Y584 194 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 SLC38A8A6NNN8 435 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 CD3EAPO15446 510 aaKnown RBP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 ITM2AO43736 263 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 C14orf80Q86SX3 495 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 ELOVL6Q9H5J4 265 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 PNPLA8Q9NP80 782 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 SCN11AQ9UI33 1791 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 E7ESA3 106 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 FFAR3O14843 346 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 RAD51BO15315 384 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 GPR42O15529 346 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 MGRN1O60291 552 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 PIK3R1P27986 724 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 TLE2Q04725 743 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 SMARCB1Q12824 385 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 POM121L1PQ3SYA9 428 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 FAM151BQ6UXP7 276 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 DCBLD1Q8N8Z6 715 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 CYGBQ8WWM9 190 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 ACRP10323 421 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 MSH3P20585 1137 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 CDH4P55283 916 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 PTPRCAPQ14761 206 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 PARP15Q460N3 678 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 PREPLQ4J6C6 727 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 GRIN3AQ8TCU5 1115 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 GDPD5Q8WTR4 605 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 HEXDCQ8WVB3 486 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 C8orf48Q96LL4 319 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 LENG8Q96PV6 779 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 C1orf232A0A0U1RR37 186 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 TMCC1O94876 653 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 GOT2P00505 430 aaKnown RBP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 PRKCGP05129 697 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 PRKCHP24723 683 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 PLOD1Q02809 727 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 DNAJC14Q6Y2X3 702 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 GPSM1Q86YR5 675 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 FAM126BQ8IXS8 530 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 NAT16Q8N8M0 369 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 FBXO22Q8NEZ5 403 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 ADNPQ9H2P0 1102 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 HS3ST4Q9Y661 456 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 RPP40O75818 363 aaKnown RBP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 AHSGP02765 367 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 LINC00032P0C843 101 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 IL10RBQ08334 325 aa6.22□□□□□ -1.41
PRKDC-201ENST00000314191 HJURPQ8NCD3 748 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 MRPL57Q9BQC6 102 aaKnown RBP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 EIF2B3Q9NR50 452 aaKnown RBP6.22□□□□□ -1.41
PRKDC-201ENST00000314191 C9JVG2 144 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 TRAFD1O14545 582 aaPredicted RBP6.21□□□□□ -1.41
PRKDC-201ENST00000314191 OR56A5P0C7T3 313 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 IL27RAQ6UWB1 636 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 RBM23Q86U06 439 aaKnown RBP6.21□□□□□ -1.41
PRKDC-201ENST00000314191 SLAIN1Q8ND83 568 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 TRAF6Q9Y4K3 522 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 MBLAC1A4D2B0 266 aaPredicted RBP6.21□□□□□ -1.41
PRKDC-201ENST00000314191 SLC10A3P09131 477 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 GMPRP36959 345 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 EMC10Q5UCC4 262 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 CACHD1Q5VU97 1274 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 GK5Q6ZS86 529 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 RP9Q8TA86 221 aaKnown RBP6.21□□□□□ -1.41
PRKDC-201ENST00000314191 TMEM159Q96B96 161 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 FAM120BQ96EK7 910 aaKnown RBP6.21□□□□□ -1.41
PRKDC-201ENST00000314191 OLFM3Q96PB7 478 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 MYO1GB0I1T2 1018 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 ZNF623O75123 536 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 EEF1DP29692 281 aaKnown RBP6.21□□□□□ -1.41
PRKDC-201ENST00000314191 CLEC6AQ6EIG7 209 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 FAM162AQ96A26 154 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 ZMYND8Q9ULU4 1186 aaPredicted RBP6.21□□□□□ -1.41
PRKDC-201ENST00000314191 RAI2Q9Y5P3 530 aa6.21□□□□□ -1.41
PRKDC-201ENST00000314191 ATP5BP06576 529 aaKnown RBP6.21□□□□□ -1.42
PRKDC-201ENST00000314191 SOAT1P35610 550 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 CYP4F8P98187 520 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF697Q5TEC3 545 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 TRNP1Q6NT89 227 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 CCDC149Q6ZUS6 474 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 FAM126AQ9BYI3 521 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-201ENST00000314191 GPR62Q9BZJ7 368 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 KLHL4Q9C0H6 718 aa6.21□□□□□ -1.42
PRKDC-201ENST00000314191 NMUR1Q9HB89 426 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms