RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 IFNA16P05015 189 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 EIF2S3LQ2VIR3 472 aaKnown RBP15.55■□□□□ 0.08
HCFC1-201ENST00000310441 SYTL5Q8TDW5 730 aaPredicted RBP15.55■□□□□ 0.08
HCFC1-201ENST00000310441 DNAJA4Q8WW22 397 aaPredicted RBP15.55■□□□□ 0.08
HCFC1-201ENST00000310441 PPP1R14BQ96C90 147 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 SPACA7Q96KW9 195 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 SPATA9Q9BWV2 254 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 C12orf4Q9NQ89 552 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 HMGXB4Q9UGU5 601 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 PSIP1O75475 530 aaKnown RBP15.55■□□□□ 0.08
HCFC1-201ENST00000310441 CCNE2O96020 404 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 AENQ8WTP8 325 aaKnown RBP15.55■□□□□ 0.08
HCFC1-201ENST00000310441 EFR3AQ14156 821 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 VPS26BQ4G0F5 336 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 JAZF1Q86VZ6 243 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 MARCH10Q8NA82 808 aaPredicted RBP15.55■□□□□ 0.08
HCFC1-201ENST00000310441 GDF3Q9NR23 364 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 CASKO14936 926 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 GPER1Q99527 375 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 IFT80Q9P2H3 777 aaPredicted RBP15.55■□□□□ 0.08
HCFC1-201ENST00000310441 TRAV19A0A0A6YYK7 116 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 TRIM38O00635 465 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 ERBB2P04626 1255 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 NIPA1Q7RTP0 329 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 PLEKHH3Q7Z736 793 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 IQCF2Q8IXL9 164 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 RAB21Q9UL25 225 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 AMHP03971 560 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 NEPROQ6NW34 567 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 METTL7BQ6UX53 244 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 LEMD2Q8NC56 503 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 SEMA4DQ92854 862 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 TP53INP1Q96A56 240 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 PCYOX1Q9UHG3 505 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.55■□□□□ 0.08
HCFC1-201ENST00000310441 BACE1P56817 501 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 RAB10P61026 200 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 MED22Q15528 200 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 AAGABQ6PD74 315 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 KBTBD2Q8IY47 623 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 INO80EQ8NBZ0 244 aaPredicted RBP15.55■□□□□ 0.08
HCFC1-201ENST00000310441 CXorf40AQ8TE69 158 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 UROC1Q96N76 676 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 MGME1Q9BQP7 344 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 GORASP1Q9BQQ3 440 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 PLEKHA1Q9HB21 404 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 MED11Q9P086 117 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 KLQ9UEF7 1012 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 CDH7Q9ULB5 785 aa15.55■□□□□ 0.08
HCFC1-201ENST00000310441 NWD1Q149M9 1564 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 GLI1P08151 1106 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 IRF8Q02556 426 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 ATG9AQ7Z3C6 839 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 FBXO30Q8TB52 745 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 SUSD6Q92537 303 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 FATE1Q969F0 183 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 COL26A1Q96A83 441 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 NDUFS2O75306 463 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 OAZ1P54368 228 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 RBM20Q5T481 1227 aaKnown RBP15.54■□□□□ 0.08
HCFC1-201ENST00000310441 SLC30A8Q8IWU4 369 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 CCDC115Q96NT0 180 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 SEMA4AQ9H3S1 761 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 GPN3Q9UHW5 284 aaPredicted RBP15.54■□□□□ 0.08
HCFC1-201ENST00000310441 DNMT3LQ9UJW3 386 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 PCDHGA3Q9Y5H0 932 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 KCNE2Q9Y6J6 123 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 GPR75-ASB3A0A0A6YYF3 556 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 SULT2A1Q06520 285 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 FSCN1Q16658 493 aaKnown RBP15.54■□□□□ 0.08
HCFC1-201ENST00000310441 GJB7Q6PEY0 223 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 FAM131AQ6UXB0 335 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 BEND5Q7L4P6 421 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 ETNPPLQ8TBG4 499 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 RAB26Q9ULW5 256 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 S100A2P29034 98 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 WEE1P30291 646 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 SUZ12Q15022 739 aaKnown RBP15.54■□□□□ 0.08
HCFC1-201ENST00000310441 MIIPQ5JXC2 388 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 POU5F2Q8N7G0 328 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 KIAA1683Q9H0B3 1180 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 MAN2B2Q9Y2E5 1009 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 FAM240BA0A1B0GVZ2 78 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 CYP2B6P20813 491 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 SMU1Q2TAY7 513 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 ZNF697Q5TEC3 545 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 MCFD2Q8NI22 146 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 ELMO1Q92556 727 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 RTKNQ9BST9 563 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 AGO4Q9HCK5 861 aaKnown RBP15.54■□□□□ 0.08
HCFC1-201ENST00000310441 IL1RAPQ9NPH3 570 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 XPNPEP3Q9NQH7 507 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 PXMP2Q9NR77 195 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 PIGNO95427 931 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 COX4I1P13073 169 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 BMPR2Q13873 1038 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 KCNA10Q16322 511 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 KCNT2Q6UVM3 1135 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 CHRDL2Q6WN34 429 aa15.54■□□□□ 0.08
HCFC1-201ENST00000310441 MAGI3Q5TCQ9 1506 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms