RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 BIRC5O15392 142 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 GPR32O75388 356 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 DLGAP3O95886 979 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 RPL17P18621 184 aaKnown RBP12.74□□□□□ -0.37
RETREG3-201ENST00000309428 FASP25445 335 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 NFYCQ13952 458 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 ADGRE1Q14246 886 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 RAP1GAP2Q684P5 730 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 MICU2Q8IYU8 434 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 TTC9BQ8N6N2 239 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 SMG8Q8ND04 991 aaKnown RBP12.74□□□□□ -0.37
RETREG3-201ENST00000309428 NXNL1Q96CM4 212 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 FRMD8P1Q9BZ68 369 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-201ENST00000309428 ADAMTS10Q9H324 1103 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 SSU72Q9NP77 194 aaKnown RBP12.74□□□□□ -0.37
RETREG3-201ENST00000309428 PCDH12Q9NPG4 1184 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 TMLHEQ9NVH6 421 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 EURLQ9NYK6 297 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 PADI3Q9ULW8 664 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 KCTD3Q9Y597 815 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 BCLAF3A2AJT9 711 aaKnown RBP12.74□□□□□ -0.37
RETREG3-201ENST00000309428 MYO1GB0I1T2 1018 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 TIMM44O43615 452 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 NRP2O60462 931 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 TADA2AO75478 443 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 CES1P23141 567 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 DNAJB2P25686 324 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 ADSLP30566 484 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-201ENST00000309428 HADHAP40939 763 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 CD86P42081 329 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 ETV4P43268 484 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 CPT1AP50416 773 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 DPYSL2Q16555 572 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 IQSEC1Q6DN90 963 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 GDF6Q6KF10 455 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-201ENST00000309428 KLHL35Q6PF15 583 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 NT5DC4Q86YG4 428 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-201ENST00000309428 ST13P5Q8NFI4 369 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-201ENST00000309428 OR6K2Q8NGY2 324 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 GRIN3AQ8TCU5 1115 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 RPL10LQ96L21 214 aaKnown RBP12.74□□□□□ -0.37
RETREG3-201ENST00000309428 QKIQ96PU8 341 aaKnown RBP eCLIP12.74□□□□□ -0.373e-6■■□□□ 11.6
RETREG3-201ENST00000309428 CXorf21Q9HAI6 301 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 MRPL40Q9NQ50 206 aaKnown RBP12.74□□□□□ -0.37
RETREG3-201ENST00000309428 BTRCQ9Y297 605 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 ORC6Q9Y5N6 252 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 HTTP42858 3142 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 CFAP99D6REC4 459 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 GRIA2P42262 883 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 SLC18A1P54219 525 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 GALNT3Q14435 633 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 DHRSXQ8N5I4 330 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 ACTRT2Q8TDY3 377 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 RERGLQ9H628 205 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 KCNH4Q9UQ05 1017 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 TRIM17Q9Y577 477 aa12.74□□□□□ -0.37
RETREG3-201ENST00000309428 HMX2A2RU54 273 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 PAGE1O75459 146 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 CNTFP26441 200 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 PCSK6P29122 969 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 GATMP50440 423 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 TSTA3Q13630 321 aaPredicted RBP12.73□□□□□ -0.37
RETREG3-201ENST00000309428 GTF2H3Q13889 308 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 CCDC153Q494R4 210 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 TMTC4Q5T4D3 741 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 GALNT18Q6P9A2 607 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 ZNF534Q76KX8 674 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 PSTKQ8IV42 348 aaKnown RBP12.73□□□□□ -0.37
RETREG3-201ENST00000309428 DQX1Q8TE96 717 aaKnown RBP12.73□□□□□ -0.37
RETREG3-201ENST00000309428 ZNF512Q96ME7 567 aaPredicted RBP12.73□□□□□ -0.37
RETREG3-201ENST00000309428 DACH2Q96NX9 599 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 RTKNQ9BST9 563 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 TLE6Q9H808 572 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 CLK4Q9HAZ1 481 aaKnown RBP12.73□□□□□ -0.37
RETREG3-201ENST00000309428 ZFYVE28Q9HCC9 887 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 PCDHGB4Q9UN71 923 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 PCDHGB5Q9Y5G0 923 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 I6L893 689 aaPredicted RBP12.73□□□□□ -0.37
RETREG3-201ENST00000309428 NCK1P16333 377 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 RAD23AP54725 363 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 MAP2K5Q13163 448 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 ADRM1Q16186 407 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 MAPK15Q8TD08 544 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 HPS1Q92902 700 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 BPIFA1Q9NP55 256 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 SHROOM3Q8TF72 1996 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 TRPC5OSA6NMA1 111 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 LSM1O15116 133 aaKnown RBP12.73□□□□□ -0.37
RETREG3-201ENST00000309428 CDH3P22223 829 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 FLT3LGP49771 235 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 TMEM26Q6ZUK4 368 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 LRRC52Q8N7C0 313 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 BTBD9Q96Q07 612 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 SIRPGQ9P1W8 387 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 ANGPTL3Q9Y5C1 460 aa12.73□□□□□ -0.37
RETREG3-201ENST00000309428 A0A1W2PQH9 124 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 SLC12A8A0AV02 714 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 AOC1P19801 751 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 KPNA1P52294 538 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms