RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 RPS9P46781 194 aaKnown RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 GCLMP48507 274 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 MARCKSL1P49006 195 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 RARRES1P49788 294 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 SELENOPP49908 381 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 RASSF2P50749 326 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 IL9RQ01113 521 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 SATB1Q01826 763 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 SRSF5Q13243 272 aaKnown RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 TUSC3Q13454 348 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 MXD4Q14582 209 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 FAM187BQ17R55 369 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 CCDC142Q17RM4 750 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 PABPC1LQ4VXU2 614 aaKnown RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 FAM78AQ5JUQ0 283 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 GLRA4Q5JXX5 417 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 PPM1LQ5SGD2 360 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 ZBTB41Q5SVQ8 909 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 LIN9Q5TKA1 542 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 LRRC38Q5VT99 294 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 CDCA2Q69YH5 1023 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 VITQ6UXI7 678 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 MTSS1LQ765P7 747 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 MAEAQ7L5Y9 396 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 CEP57Q86XR8 500 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 DNAAF5Q86Y56 855 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 KATNAL2Q8IYT4 538 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 MCOLN2Q8IZK6 566 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 TAB3Q8N5C8 712 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 GPATCH11Q8N954 259 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 EXD1Q8NHP7 514 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 PARD3BQ8TEW8 1205 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 DYDC1Q8WWB3 177 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 TCP11Q8WWU5 503 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 N4BP2L2Q92802 583 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 INPP5DQ92835 1189 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 MIEF2Q96C03 454 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 SHDQ96IW2 340 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 CFAP57Q96MR6 1250 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 PPP1R10Q96QC0 940 aaKnown RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 TUBB6Q9BUF5 446 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 KIFC3Q9BVG8 833 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 FRMD8P1Q9BZ68 369 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 POLR3FQ9H1D9 316 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 ECT2Q9H8V3 914 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 MRPL47Q9HD33 250 aaKnown RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 EURLQ9NYK6 297 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 NCDNQ9UBB6 729 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 MTRRQ9UBK8 725 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 ASIC3Q9UHC3 531 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 DPP7Q9UHL4 492 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 ANAPC5Q9UJX4 755 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 DRG1Q9Y295 367 aaKnown RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 C15orf41Q9Y2V0 281 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 NEU2Q9Y3R4 380 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 CEP83Q9Y592 693 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 CDY1Q9Y6F8 540 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 SCINQ9Y6U3 715 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 ACACAQ13085 2346 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 HELZP42694 1942 aaKnown RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 HELZ2Q9BYK8 2649 aaKnown RBP5.03□□□□□ -1.6
CKS1B-201ENST00000308987 ASXL3Q9C0F0 2248 aa5.03□□□□□ -1.6
CKS1B-201ENST00000308987 ARHGEF37A1IGU5 675 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 WDR27A2RRH5 827 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 FAM47DPA6NHR8 397 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 C9orf118A6NHY6 69 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 LRRIQ4A6NIV6 560 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 TMEM110-MUSTN1A8MSY1 372 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 PATE3B3GLJ2 98 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 TCP11X1B4DZS4 312 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 ANKRD63C9JTQ0 380 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 TMEM189-UBE2V1I3L0A0 370 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 K7ESF4 209 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 CLDN3O15551 220 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 DCTN3O75935 186 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 ABLIM3O94929 683 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 UNC5CO95185 931 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 EPHX1P07099 455 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 THP07101 528 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 CLTAP09496 248 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 CHRNB1P11230 501 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 BRAFP15056 766 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 GJA1P17302 382 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 STX2P32856 288 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 VIPR2P41587 438 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 STAT5AP42229 794 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 MSH2P43246 934 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 CLCNKBP51801 687 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 ITGA8P53708 1063 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 PPP2CBP62714 309 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 PPP2CAP67775 309 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 ROR1Q01973 937 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 MCL1Q07820 350 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 ADCY1Q08828 1119 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 HNRNPA0Q13151 305 aaKnown RBP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 KLF1Q13351 362 aaPredicted RBP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 MRPL58Q14197 206 aaKnown RBP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 PCBP1Q15365 356 aaKnown RBP eCLIP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 SNRNP35Q16560 246 aaKnown RBP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 UPP1Q16831 310 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms