RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ACOX2Q99424 681 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 ELL3Q9HB65 397 aaPredicted RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 SMPD4Q9NXE4 827 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 PRODHO43272 600 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 CCNT2O60583 730 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 ITGAVP06756 1048 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 PGAM1P18669 254 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 CRYMQ14894 314 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 KYNUQ16719 465 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 LLGL2Q6P1M3 1020 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 KCNT2Q6UVM3 1135 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 SIX5Q8N196 739 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 IL31RAQ8NI17 732 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF671Q8TAW3 534 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 SPPL2AQ8TCT8 520 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 HHATLQ9HCP6 504 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 H3BN98 237 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 GTPBP1O00178 669 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 VAC14Q08AM6 782 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 LRRC36Q1X8D7 754 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 LIN54Q6MZP7 749 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 RNF44Q7L0R7 432 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 NKAPQ8N5F7 415 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 COLGALT1Q8NBJ5 622 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 KCTD14Q9BQ13 255 aaPredicted RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 IL23AQ9NPF7 189 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 SVILO95425 2214 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 PLXNB2O15031 1838 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 PNMA8CA0A1B0GUJ8 204 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 C5orf60A6NFR6 353 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 MAN2B1O00754 1011 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 MAGEB3O15480 346 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 ATP9AO75110 1047 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 RBMXL2O75526 392 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 PNMA6AP0CW24 399 aaPredicted RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 MRPS25P82663 173 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 INTS11Q5TA45 600 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 DOK6Q6PKX4 331 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 PHYKPLQ8IUZ5 450 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 ADGRG2Q8IZP9 1017 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF786Q8N393 782 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 UTP15Q8TED0 518 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 FRMD6Q96NE9 622 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 TBL1YQ9BQ87 522 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 IL25Q9H293 177 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 TBL1XO60907 577 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 MFN2O95140 757 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 C8AP07357 584 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 ELFN1P0C7U0 828 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 AP1S1P61966 158 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 EOGTQ5NDL2 527 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 ALKBH2Q6NS38 261 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 C4orf33Q8N1A6 199 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 TCAIMQ8N3R3 496 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 SETD9Q8NE22 299 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF296Q8WUU4 475 aaPredicted RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 CAPSLQ8WWF8 208 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 TIMM13Q9Y5L4 95 aaPredicted RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 ADAMTS7Q9UKP4 1686 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 MCIDASD6RGH6 385 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 ABCB1P08183 1280 aaPredicted RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 CCNB1P14635 433 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 KCNA3P22001 575 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 ACAT1P24752 427 aaKnown RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 ACTR3P61158 418 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 ARID5BQ14865 1188 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 AFTPHQ6ULP2 937 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 ANKS1BQ7Z6G8 1248 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 LPCAT1Q8NF37 534 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 EPS8L1Q8TE68 723 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 FICDQ9BVA6 458 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 FZD8Q9H461 694 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 COMMD9Q9P000 198 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 MCM8Q9UJA3 840 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 TIAM2Q8IVF5 1701 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 KCNE1P15382 129 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 H2AFXP16104 143 aaPredicted RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 RBFAQ8N0V3 343 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 DDHD1Q8NEL9 900 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 SGF29Q96ES7 293 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 FAM126AQ9BYI3 521 aaPredicted RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 TRMT13Q9NUP7 481 aaKnown RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 TSC22D4Q9Y3Q8 395 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 E2F8A0AVK6 867 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 LPOP22079 712 aaPredicted RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 MIPP30301 263 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 PTSQ03393 145 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 PUS10Q3MIT2 529 aaKnown RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 FAM228AQ86W67 206 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 DENND1CQ8IV53 801 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 MDM1Q8TC05 714 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 ARNTL2Q8WYA1 636 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 BDH2Q9BUT1 245 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 RIPK3Q9Y572 518 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 ATG7O95352 703 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 TPP2P29144 1249 aaPredicted RBP8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 NDST2P52849 883 aa8.37□□□□□ -1.07
PCDHB1-201ENST00000306549 CDH4P55283 916 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms