RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 RABGGTBP53611 331 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 INTS6LQ5JSJ4 861 aaKnown RBP10.98□□□□□ -0.65
LSM3-201ENST00000306024 SDHAF4Q5VUM1 108 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 MON1BQ7L1V2 547 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 PEX5LQ8IYB4 626 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 ALDH16A1Q8IZ83 802 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 CRYBG2Q8N1P7 616 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 C3orf58Q8NDZ4 430 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 RIN3Q8TB24 985 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 OLFM1Q99784 485 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 ACBD6Q9BR61 282 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 ENTPD7Q9NQZ7 604 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 FETUBQ9UGM5 382 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 PADI4Q9UM07 663 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 F8W810 466 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 M0R3G1 203 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 MYO1DO94832 1006 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 MOCS2O96007 188 aaPredicted RBP10.98□□□□□ -0.65
LSM3-201ENST00000306024 ITGB1P05556 798 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 ITGAVP06756 1048 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 USP17L7P0C7H9 530 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 PABPC1P11940 636 aaKnown RBP10.98□□□□□ -0.65
LSM3-201ENST00000306024 ZNF182P17025 639 aaPredicted RBP10.98□□□□□ -0.65
LSM3-201ENST00000306024 OR1D2P34982 312 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 ZNF132P52740 706 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 SLC6A3Q01959 620 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 PSMD5Q16401 504 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 CCDC142Q17RM4 750 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 ARL13BQ3SXY8 428 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 PPM1LQ5SGD2 360 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 RSBN1Q5VWQ0 802 aaPredicted RBP10.98□□□□□ -0.65
LSM3-201ENST00000306024 KCNT2Q6UVM3 1135 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 C14orf80Q86SX3 495 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 ADCK1Q86TW2 530 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 PCDH20Q8N6Y1 951 aaKnown RBP10.98□□□□□ -0.65
LSM3-201ENST00000306024 EDEM1Q92611 657 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 CNPY3Q9BT09 278 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 CRISPLD2Q9H0B8 497 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 TJP2Q9UDY2 1190 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 TBX21Q9UL17 535 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 SLC27A5Q9Y2P5 690 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 MAP3K6O95382 1288 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 LAG3P18627 525 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 GPD2P43304 727 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 IDH3AP50213 366 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 MOGQ16653 247 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 CCDC14Q49A88 953 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 DEPDC1Q5TB30 811 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 ZNF598Q86UK7 904 aaKnown RBP10.98□□□□□ -0.65
LSM3-201ENST00000306024 LRTOMTQ8WZ04 291 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 DACH2Q96NX9 599 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 SIK2Q9H0K1 926 aa10.98□□□□□ -0.65
LSM3-201ENST00000306024 STN1Q9H668 368 aaKnown RBP10.98□□□□□ -0.65
LSM3-201ENST00000306024 NOL11Q9H8H0 719 aaKnown RBP10.98□□□□□ -0.65
LSM3-201ENST00000306024 M0QYT0 321 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 GALTP07902 379 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 ENO2P09104 434 aaPredicted RBP10.97□□□□□ -0.65
LSM3-201ENST00000306024 RPL17P18621 184 aaKnown RBP10.97□□□□□ -0.65
LSM3-201ENST00000306024 TYMPP19971 482 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 IL10P22301 178 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 CYP2F1P24903 491 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 PIK3R1P27986 724 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 HOXD11P31277 338 aaPredicted RBP10.97□□□□□ -0.65
LSM3-201ENST00000306024 CTNNB1P35222 781 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 CPOXP36551 454 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 ETV4P43268 484 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 YWHAZP63104 245 aaKnown RBP10.97□□□□□ -0.65
LSM3-201ENST00000306024 SLC18A2Q05940 514 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 FAM182AQ5T1J6 154 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 RNF111Q6ZNA4 994 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 SUN5Q8TC36 379 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 FBXO32Q969P5 355 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 HERC2P3Q9BVR0 1158 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 RBM38Q9H0Z9 239 aaKnown RBP10.97□□□□□ -0.65
LSM3-201ENST00000306024 RAD21L1Q9H4I0 556 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 DDIT4Q9NX09 232 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 HCSTQ9UBK5 93 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 SNX5Q9Y5X3 404 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 RGSL1A5PLK6 1076 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 PHGDHO43175 533 aaKnown RBP10.97□□□□□ -0.65
LSM3-201ENST00000306024 TMEM63AO94886 807 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 FBXO21O94952 628 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 PFKMP08237 780 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 KLF1Q13351 362 aaPredicted RBP10.97□□□□□ -0.65
LSM3-201ENST00000306024 XKR4Q5GH76 650 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 AARS2Q5JTZ9 985 aaKnown RBP10.97□□□□□ -0.65
LSM3-201ENST00000306024 ARHGAP17Q68EM7 881 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 PSRC1Q6PGN9 363 aaPredicted RBP10.97□□□□□ -0.65
LSM3-201ENST00000306024 PRSS55Q6UWB4 352 aaPredicted RBP10.97□□□□□ -0.65
LSM3-201ENST00000306024 CCNYL1Q8N7R7 359 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 JOSD2Q8TAC2 188 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 HM13Q8TCT9 377 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 FNIP1Q8TF40 1166 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 AGAP3Q96P47 875 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 MARCH7Q9H992 704 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 IL23AQ9NPF7 189 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 MOSPD1Q9UJG1 213 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 CNTN6Q9UQ52 1028 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 TBC1D30Q9Y2I9 924 aa10.97□□□□□ -0.65
LSM3-201ENST00000306024 DGKBQ9Y6T7 804 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms